Gene : Phvul.L010143 P. vulgaris v2.1
Defline:  (1 of 10) PTHR10593//PTHR10593:SF27 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Genomic Order:  86
Name:  ? Phvul.L010143 Secondary Identifier:  ? PAC:37178894
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L010143 0.5kb upstream 0.5kb upstream 2719 true scaffold_15: 697383-700101 Phaseolus vulgaris
Phvul.L010143 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 697383-697882 Phaseolus vulgaris
Phvul.L010143 0.5kb downstream 0.5kb downstream 2719 true scaffold_15: 697883-700601 Phaseolus vulgaris
Phvul.L010143 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 700102-700601 Phaseolus vulgaris
Phvul.L010143 1.0kb upstream 1.0kb upstream 3219 true scaffold_15: 696883-700101 Phaseolus vulgaris
Phvul.L010143 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 696883-697882 Phaseolus vulgaris
Phvul.L010143 1.0kb downstream 1.0kb downstream 3219 true scaffold_15: 697883-701101 Phaseolus vulgaris
Phvul.L010143 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 700102-701101 Phaseolus vulgaris
Phvul.L010143 2.0kb upstream 2.0kb upstream 4219 true scaffold_15: 695883-700101 Phaseolus vulgaris
Phvul.L010143 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 695883-697882 Phaseolus vulgaris
Phvul.L010143 2.0kb downstream 2.0kb downstream 4219 true scaffold_15: 697883-702101 Phaseolus vulgaris
Phvul.L010143 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 700102-702101 Phaseolus vulgaris
Phvul.L010143 5.0kb upstream 5.0kb upstream 7219 true scaffold_15: 692883-700101 Phaseolus vulgaris
Phvul.L010143 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 692883-697882 Phaseolus vulgaris
Phvul.L010143 5.0kb downstream 5.0kb downstream 7219 true scaffold_15: 697883-705101 Phaseolus vulgaris
Phvul.L010143 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 700102-705101 Phaseolus vulgaris
Phvul.L010143 10.0kb upstream 10.0kb upstream 12219 true scaffold_15: 687883-700101 Phaseolus vulgaris
Phvul.L010143 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 687883-697882 Phaseolus vulgaris
Phvul.L010143 10.0kb downstream 10.0kb downstream 12219 true scaffold_15: 697883-710101 Phaseolus vulgaris
Phvul.L010143 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 700102-710101 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313175 5265 Fabidae View MSA
124071886 5270 Rosid View MSA
123745517 5271 Pentapetalae View MSA
122795224 5272 Eudicot View MSA
122047966 5273 Angiosperm View MSA
121348294 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0314177 0.0 0.155706 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.107797 0.0 0.46983 Low  
cufflinks 0.175721 0.0 0.734432 Low  
cufflinks 0.661019 0.0 2.49437    
cufflinks 0.700573 0.0 2.62222    
cufflinks 0.494193 0.0 1.90077 Low  
cufflinks 0.158088 0.0 0.666564 Low  
cufflinks 0.382243 0.0 1.50038 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.508086 0.0 1.96151 Low  

0 Strain