Gene : Phvul.011G077100 P. vulgaris v2.1
Defline:  (1 of 25) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  779
Name:  ? Phvul.011G077100 Secondary Identifier:  ? PAC:37156929
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G077100 0.5kb upstream 0.5kb upstream 1352 true Chr11: 7099421-7100772 Phaseolus vulgaris
Phvul.011G077100 0.5kb upstream 0.5kb upstream 500 false Chr11: 7100273-7100772 Phaseolus vulgaris
Phvul.011G077100 0.5kb downstream 0.5kb downstream 1352 true Chr11: 7098921-7100272 Phaseolus vulgaris
Phvul.011G077100 0.5kb downstream 0.5kb downstream 500 false Chr11: 7098921-7099420 Phaseolus vulgaris
Phvul.011G077100 1.0kb upstream 1.0kb upstream 1852 true Chr11: 7099421-7101272 Phaseolus vulgaris
Phvul.011G077100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7100273-7101272 Phaseolus vulgaris
Phvul.011G077100 1.0kb downstream 1.0kb downstream 1852 true Chr11: 7098421-7100272 Phaseolus vulgaris
Phvul.011G077100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7098421-7099420 Phaseolus vulgaris
Phvul.011G077100 2.0kb upstream 2.0kb upstream 2852 true Chr11: 7099421-7102272 Phaseolus vulgaris
Phvul.011G077100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7100273-7102272 Phaseolus vulgaris
Phvul.011G077100 2.0kb downstream 2.0kb downstream 2852 true Chr11: 7097421-7100272 Phaseolus vulgaris
Phvul.011G077100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7097421-7099420 Phaseolus vulgaris
Phvul.011G077100 5.0kb upstream 5.0kb upstream 5852 true Chr11: 7099421-7105272 Phaseolus vulgaris
Phvul.011G077100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7100273-7105272 Phaseolus vulgaris
Phvul.011G077100 5.0kb downstream 5.0kb downstream 5852 true Chr11: 7094421-7100272 Phaseolus vulgaris
Phvul.011G077100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7094421-7099420 Phaseolus vulgaris
Phvul.011G077100 10.0kb upstream 10.0kb upstream 10852 true Chr11: 7099421-7110272 Phaseolus vulgaris
Phvul.011G077100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7100273-7110272 Phaseolus vulgaris
Phvul.011G077100 10.0kb downstream 10.0kb downstream 10852 true Chr11: 7089421-7100272 Phaseolus vulgaris
Phvul.011G077100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7089421-7099420 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297718 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.177842 0.0 0.768531 Low  
cufflinks 0.392531 0.0 1.59053 Low  
cufflinks 0.114088 0.0 0.514853 Low  
cufflinks 0.448299 0.0 1.78039 Low  
cufflinks 26.2936 0.0 70.7439    
cufflinks 0.0886787 0.0 0.411512 Low  
cufflinks 44.7005 0.0 116.181 High High
cufflinks 8.21222 0.0 24.6219    
cufflinks 21.0196 0.0 57.3772    
cufflinks 0.026003 0.0 0.139087 Low Low
cufflinks 132.573 0.0 349.654 High High

0 Strain