Gene : Phvul.011G077700 P. vulgaris v2.1
Defline:  (1 of 25) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  785
Name:  ? Phvul.011G077700 Secondary Identifier:  ? PAC:37155846
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G077700 0.5kb upstream 0.5kb upstream 1611 true Chr11: 7144467-7146077 Phaseolus vulgaris
Phvul.011G077700 0.5kb upstream 0.5kb upstream 500 false Chr11: 7144467-7144966 Phaseolus vulgaris
Phvul.011G077700 0.5kb downstream 0.5kb downstream 1611 true Chr11: 7144967-7146577 Phaseolus vulgaris
Phvul.011G077700 0.5kb downstream 0.5kb downstream 500 false Chr11: 7146078-7146577 Phaseolus vulgaris
Phvul.011G077700 1.0kb upstream 1.0kb upstream 2111 true Chr11: 7143967-7146077 Phaseolus vulgaris
Phvul.011G077700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7143967-7144966 Phaseolus vulgaris
Phvul.011G077700 1.0kb downstream 1.0kb downstream 2111 true Chr11: 7144967-7147077 Phaseolus vulgaris
Phvul.011G077700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7146078-7147077 Phaseolus vulgaris
Phvul.011G077700 2.0kb upstream 2.0kb upstream 3111 true Chr11: 7142967-7146077 Phaseolus vulgaris
Phvul.011G077700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7142967-7144966 Phaseolus vulgaris
Phvul.011G077700 2.0kb downstream 2.0kb downstream 3111 true Chr11: 7144967-7148077 Phaseolus vulgaris
Phvul.011G077700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7146078-7148077 Phaseolus vulgaris
Phvul.011G077700 5.0kb upstream 5.0kb upstream 6111 true Chr11: 7139967-7146077 Phaseolus vulgaris
Phvul.011G077700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7139967-7144966 Phaseolus vulgaris
Phvul.011G077700 5.0kb downstream 5.0kb downstream 6111 true Chr11: 7144967-7151077 Phaseolus vulgaris
Phvul.011G077700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7146078-7151077 Phaseolus vulgaris
Phvul.011G077700 10.0kb upstream 10.0kb upstream 11111 true Chr11: 7134967-7146077 Phaseolus vulgaris
Phvul.011G077700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7134967-7144966 Phaseolus vulgaris
Phvul.011G077700 10.0kb downstream 10.0kb downstream 11111 true Chr11: 7144967-7156077 Phaseolus vulgaris
Phvul.011G077700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7146078-7156077 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.16729 0.0 4.24103    
cufflinks 0.556117 0.0 2.14623    
cufflinks 0.062955 0.0 0.294044 Low Low
cufflinks 1.00221 0.0 3.67582    
cufflinks 73.1246 0.0 189.636 High  
cufflinks 0.0555206 0.0 0.262953 Low Low
cufflinks 91.7763 0.0 241.137 High High
cufflinks 16.2775 0.0 44.5738    
cufflinks 38.5417 0.0 99.9263 High  
cufflinks 1.46322 0.0 5.22503    
cufflinks 275.017 0.0 797.068 High High

0 Strain