Gene : Phvul.011G075050 P. vulgaris v2.1
Defline:  (1 of 25) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  773
Name:  ? Phvul.011G075050 Secondary Identifier:  ? PAC:37155795
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G075050 0.5kb upstream 0.5kb upstream 1547 true Chr11: 7006393-7007939 Phaseolus vulgaris
Phvul.011G075050 0.5kb upstream 0.5kb upstream 500 false Chr11: 7007440-7007939 Phaseolus vulgaris
Phvul.011G075050 0.5kb downstream 0.5kb downstream 1547 true Chr11: 7005893-7007439 Phaseolus vulgaris
Phvul.011G075050 0.5kb downstream 0.5kb downstream 500 false Chr11: 7005893-7006392 Phaseolus vulgaris
Phvul.011G075050 1.0kb upstream 1.0kb upstream 2047 true Chr11: 7006393-7008439 Phaseolus vulgaris
Phvul.011G075050 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7007440-7008439 Phaseolus vulgaris
Phvul.011G075050 1.0kb downstream 1.0kb downstream 2047 true Chr11: 7005393-7007439 Phaseolus vulgaris
Phvul.011G075050 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7005393-7006392 Phaseolus vulgaris
Phvul.011G075050 2.0kb upstream 2.0kb upstream 3047 true Chr11: 7006393-7009439 Phaseolus vulgaris
Phvul.011G075050 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7007440-7009439 Phaseolus vulgaris
Phvul.011G075050 2.0kb downstream 2.0kb downstream 3047 true Chr11: 7004393-7007439 Phaseolus vulgaris
Phvul.011G075050 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7004393-7006392 Phaseolus vulgaris
Phvul.011G075050 5.0kb upstream 5.0kb upstream 6047 true Chr11: 7006393-7012439 Phaseolus vulgaris
Phvul.011G075050 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7007440-7012439 Phaseolus vulgaris
Phvul.011G075050 5.0kb downstream 5.0kb downstream 6047 true Chr11: 7001393-7007439 Phaseolus vulgaris
Phvul.011G075050 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7001393-7006392 Phaseolus vulgaris
Phvul.011G075050 10.0kb upstream 10.0kb upstream 11047 true Chr11: 7006393-7017439 Phaseolus vulgaris
Phvul.011G075050 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7007440-7017439 Phaseolus vulgaris
Phvul.011G075050 10.0kb downstream 10.0kb downstream 11047 true Chr11: 6996393-7007439 Phaseolus vulgaris
Phvul.011G075050 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6996393-7006392 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0389709 0.0 0.19314 Low  
cufflinks 0.0438152 0.0 0.213997 Low  
cufflinks 0.0927822 0.0 0.417942 Low  
cufflinks 0.0745313 0.0 0.342332 Low  
cufflinks 5.44747 0.0 16.8898    
cufflinks 0.00310649 0.0 0.0263275 Low Low
cufflinks 10.457 0.0 29.8248   High
cufflinks 1.80327 0.0 6.28283    
cufflinks 4.41269 0.0 13.8498    
cufflinks 7.65832E-4 0.0 0.0126796 Low Low
cufflinks 38.9484 0.0 101.219 High High

0 Strain