Gene : Phvul.011G076000 P. vulgaris v2.1
Defline:  (1 of 25) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  242
Name:  ? Phvul.011G076000 Secondary Identifier:  ? PAC:37157407
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G076000 0.5kb upstream 0.5kb upstream 1379 true Chr11: 1925790-1927168 Phaseolus vulgaris
Phvul.011G076000 0.5kb upstream 0.5kb upstream 500 false Chr11: 1926669-1927168 Phaseolus vulgaris
Phvul.011G076000 0.5kb downstream 0.5kb downstream 1379 true Chr11: 1925290-1926668 Phaseolus vulgaris
Phvul.011G076000 0.5kb downstream 0.5kb downstream 500 false Chr11: 1925290-1925789 Phaseolus vulgaris
Phvul.011G076000 1.0kb upstream 1.0kb upstream 1879 true Chr11: 1925790-1927668 Phaseolus vulgaris
Phvul.011G076000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1926669-1927668 Phaseolus vulgaris
Phvul.011G076000 1.0kb downstream 1.0kb downstream 1879 true Chr11: 1924790-1926668 Phaseolus vulgaris
Phvul.011G076000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1924790-1925789 Phaseolus vulgaris
Phvul.011G076000 2.0kb upstream 2.0kb upstream 2879 true Chr11: 1925790-1928668 Phaseolus vulgaris
Phvul.011G076000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1926669-1928668 Phaseolus vulgaris
Phvul.011G076000 2.0kb downstream 2.0kb downstream 2879 true Chr11: 1923790-1926668 Phaseolus vulgaris
Phvul.011G076000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1923790-1925789 Phaseolus vulgaris
Phvul.011G076000 5.0kb upstream 5.0kb upstream 5879 true Chr11: 1925790-1931668 Phaseolus vulgaris
Phvul.011G076000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1926669-1931668 Phaseolus vulgaris
Phvul.011G076000 5.0kb downstream 5.0kb downstream 5879 true Chr11: 1920790-1926668 Phaseolus vulgaris
Phvul.011G076000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1920790-1925789 Phaseolus vulgaris
Phvul.011G076000 10.0kb upstream 10.0kb upstream 10879 true Chr11: 1925790-1936668 Phaseolus vulgaris
Phvul.011G076000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1926669-1936668 Phaseolus vulgaris
Phvul.011G076000 10.0kb downstream 10.0kb downstream 10879 true Chr11: 1915790-1926668 Phaseolus vulgaris
Phvul.011G076000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1915790-1925789 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00612812 0.0 0.0424243 Low Low
cufflinks 0.203131 0.0 0.86598 Low  
cufflinks 0.200924 0.0 0.856327 Low  
cufflinks 0.174501 0.0 0.751187 Low  
cufflinks 4.75256 0.0 15.2859    
cufflinks 0.0737824 0.0 0.346894 Low  
cufflinks 8.08618 0.0 24.222   High
cufflinks 1.934 0.0 6.82526    
cufflinks 3.03633 0.0 10.1582    
cufflinks 0.0293421 0.0 0.153987 Low Low
cufflinks 30.7935 0.0 81.8377   High

0 Strain