Gene : Phvul.011G078300 P. vulgaris v2.1
Defline:  (1 of 2) K07359 - calcium/calmodulin-dependent protein kinase kinase (CAMKK) Genomic Order:  787
Name:  ? Phvul.011G078300 Secondary Identifier:  ? PAC:37154855
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G078300 0.5kb upstream 0.5kb upstream 6423 true Chr11: 7161514-7167936 Phaseolus vulgaris
Phvul.011G078300 0.5kb upstream 0.5kb upstream 500 false Chr11: 7161514-7162013 Phaseolus vulgaris
Phvul.011G078300 0.5kb downstream 0.5kb downstream 6423 true Chr11: 7162014-7168436 Phaseolus vulgaris
Phvul.011G078300 0.5kb downstream 0.5kb downstream 500 false Chr11: 7167937-7168436 Phaseolus vulgaris
Phvul.011G078300 1.0kb upstream 1.0kb upstream 6923 true Chr11: 7161014-7167936 Phaseolus vulgaris
Phvul.011G078300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7161014-7162013 Phaseolus vulgaris
Phvul.011G078300 1.0kb downstream 1.0kb downstream 6923 true Chr11: 7162014-7168936 Phaseolus vulgaris
Phvul.011G078300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7167937-7168936 Phaseolus vulgaris
Phvul.011G078300 2.0kb upstream 2.0kb upstream 7923 true Chr11: 7160014-7167936 Phaseolus vulgaris
Phvul.011G078300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7160014-7162013 Phaseolus vulgaris
Phvul.011G078300 2.0kb downstream 2.0kb downstream 7923 true Chr11: 7162014-7169936 Phaseolus vulgaris
Phvul.011G078300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7167937-7169936 Phaseolus vulgaris
Phvul.011G078300 5.0kb upstream 5.0kb upstream 10923 true Chr11: 7157014-7167936 Phaseolus vulgaris
Phvul.011G078300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7157014-7162013 Phaseolus vulgaris
Phvul.011G078300 5.0kb downstream 5.0kb downstream 10923 true Chr11: 7162014-7172936 Phaseolus vulgaris
Phvul.011G078300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7167937-7172936 Phaseolus vulgaris
Phvul.011G078300 10.0kb upstream 10.0kb upstream 15923 true Chr11: 7152014-7167936 Phaseolus vulgaris
Phvul.011G078300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7152014-7162013 Phaseolus vulgaris
Phvul.011G078300 10.0kb downstream 10.0kb downstream 15923 true Chr11: 7162014-7177936 Phaseolus vulgaris
Phvul.011G078300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7167937-7177936 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309675 5265 Fabidae View MSA
124062424 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5335 0.0 35.3735   Low
cufflinks 16.673 0.0 43.3025    
cufflinks 21.6721 0.0 56.0246    
cufflinks 14.5087 0.0 38.0038    
cufflinks 14.5311 0.0 38.0514    
cufflinks 22.3254 0.0 57.7089    
cufflinks 21.3867 0.0 55.302    
cufflinks 28.0816 0.0 72.7442 High High
cufflinks 15.7247 0.0 40.9822    
cufflinks 12.9672 0.0 34.0611   Low
cufflinks 19.7234 0.0 51.0829    

0 Strain