Gene : Phvul.011G070100 P. vulgaris v2.1
Defline:  (1 of 1) K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A) Genomic Order:  722
Name:  ? Phvul.011G070100 Secondary Identifier:  ? PAC:37156272
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G070100 0.5kb upstream 0.5kb upstream 22782 true Chr11: 6295133-6317914 Phaseolus vulgaris
Phvul.011G070100 0.5kb upstream 0.5kb upstream 500 false Chr11: 6295133-6295632 Phaseolus vulgaris
Phvul.011G070100 0.5kb downstream 0.5kb downstream 22782 true Chr11: 6295633-6318414 Phaseolus vulgaris
Phvul.011G070100 0.5kb downstream 0.5kb downstream 500 false Chr11: 6317915-6318414 Phaseolus vulgaris
Phvul.011G070100 1.0kb upstream 1.0kb upstream 23282 true Chr11: 6294633-6317914 Phaseolus vulgaris
Phvul.011G070100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6294633-6295632 Phaseolus vulgaris
Phvul.011G070100 1.0kb downstream 1.0kb downstream 23282 true Chr11: 6295633-6318914 Phaseolus vulgaris
Phvul.011G070100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6317915-6318914 Phaseolus vulgaris
Phvul.011G070100 2.0kb upstream 2.0kb upstream 24282 true Chr11: 6293633-6317914 Phaseolus vulgaris
Phvul.011G070100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6293633-6295632 Phaseolus vulgaris
Phvul.011G070100 2.0kb downstream 2.0kb downstream 24282 true Chr11: 6295633-6319914 Phaseolus vulgaris
Phvul.011G070100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6317915-6319914 Phaseolus vulgaris
Phvul.011G070100 5.0kb upstream 5.0kb upstream 27282 true Chr11: 6290633-6317914 Phaseolus vulgaris
Phvul.011G070100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6290633-6295632 Phaseolus vulgaris
Phvul.011G070100 5.0kb downstream 5.0kb downstream 27282 true Chr11: 6295633-6322914 Phaseolus vulgaris
Phvul.011G070100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6317915-6322914 Phaseolus vulgaris
Phvul.011G070100 10.0kb upstream 10.0kb upstream 32282 true Chr11: 6285633-6317914 Phaseolus vulgaris
Phvul.011G070100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6285633-6295632 Phaseolus vulgaris
Phvul.011G070100 10.0kb downstream 10.0kb downstream 32282 true Chr11: 6295633-6327914 Phaseolus vulgaris
Phvul.011G070100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6317915-6327914 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041213 5273 Angiosperm View MSA
122298997 5265 Fabidae View MSA
124067709 5270 Rosid View MSA
123749411 5271 Pentapetalae View MSA
122792408 5272 Eudicot View MSA
121346672 5274 Embryophyte View MSA
123424215 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.17034 0.0 4.75715   Low
cufflinks 3.67168 0.0 11.9539    
cufflinks 5.01308 0.0 16.0213    
cufflinks 1.37068 0.0 5.37389   Low
cufflinks 3.70675 0.0 11.8161    
cufflinks 5.86252 0.0 19.8552    
cufflinks 6.36608 0.0 21.2796    
cufflinks 6.52317 0.0 21.2315    
cufflinks 4.65957 0.0 14.9236    
cufflinks 4.51019 0.0 15.8212    
cufflinks 3.50759 0.0 11.5409    

0 Strain