Gene : Phvul.L002343 P. vulgaris v2.1
Defline:  (1 of 3) PTHR33431:SF2 - GB Genomic Order:  8
Name:  ? Phvul.L002343 Secondary Identifier:  ? PAC:37178880
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L002343 0.5kb upstream 0.5kb upstream 2497 true scaffold_15: 55343-57839 Phaseolus vulgaris
Phvul.L002343 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 57340-57839 Phaseolus vulgaris
Phvul.L002343 0.5kb downstream 0.5kb downstream 2497 true scaffold_15: 54843-57339 Phaseolus vulgaris
Phvul.L002343 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 54843-55342 Phaseolus vulgaris
Phvul.L002343 1.0kb upstream 1.0kb upstream 2997 true scaffold_15: 55343-58339 Phaseolus vulgaris
Phvul.L002343 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 57340-58339 Phaseolus vulgaris
Phvul.L002343 1.0kb downstream 1.0kb downstream 2997 true scaffold_15: 54343-57339 Phaseolus vulgaris
Phvul.L002343 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 54343-55342 Phaseolus vulgaris
Phvul.L002343 2.0kb upstream 2.0kb upstream 3997 true scaffold_15: 55343-59339 Phaseolus vulgaris
Phvul.L002343 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 57340-59339 Phaseolus vulgaris
Phvul.L002343 2.0kb downstream 2.0kb downstream 3997 true scaffold_15: 53343-57339 Phaseolus vulgaris
Phvul.L002343 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 53343-55342 Phaseolus vulgaris
Phvul.L002343 5.0kb upstream 5.0kb upstream 6997 true scaffold_15: 55343-62339 Phaseolus vulgaris
Phvul.L002343 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 57340-62339 Phaseolus vulgaris
Phvul.L002343 5.0kb downstream 5.0kb downstream 6997 true scaffold_15: 50343-57339 Phaseolus vulgaris
Phvul.L002343 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 50343-55342 Phaseolus vulgaris
Phvul.L002343 10.0kb upstream 10.0kb upstream 11997 true scaffold_15: 55343-67339 Phaseolus vulgaris
Phvul.L002343 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 57340-67339 Phaseolus vulgaris
Phvul.L002343 10.0kb downstream 10.0kb downstream 11997 true scaffold_15: 45343-57339 Phaseolus vulgaris
Phvul.L002343 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 45343-55342 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297007 5265 Fabidae View MSA
124070885 5270 Rosid View MSA
123750742 5271 Pentapetalae View MSA
122794296 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.75738 0.0 27.7811   High
cufflinks 4.70709 0.0 14.6291    
cufflinks 2.01631 0.0 6.90347    
cufflinks 0.727468 0.0 2.7218   Low
cufflinks 0.785363 0.0 2.92611   Low
cufflinks 1.7449 0.0 6.05897    
cufflinks 2.41241 0.0 8.0292    
cufflinks 1.64125 0.0 5.73167    
cufflinks 1.44149 0.0 5.08512    
cufflinks 13.9707 0.0 38.7167   High
cufflinks 0.745689 0.0 2.80237   Low

0 Strain