Gene : Phvul.011G069400 P. vulgaris v2.1
Defline:  (1 of 2) K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2) Genomic Order:  715
Name:  ? Phvul.011G069400 Secondary Identifier:  ? PAC:37155491
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G069400 0.5kb upstream 0.5kb upstream 10728 true Chr11: 6215803-6226530 Phaseolus vulgaris
Phvul.011G069400 0.5kb upstream 0.5kb upstream 500 false Chr11: 6226031-6226530 Phaseolus vulgaris
Phvul.011G069400 0.5kb downstream 0.5kb downstream 10728 true Chr11: 6215303-6226030 Phaseolus vulgaris
Phvul.011G069400 0.5kb downstream 0.5kb downstream 500 false Chr11: 6215303-6215802 Phaseolus vulgaris
Phvul.011G069400 1.0kb upstream 1.0kb upstream 11228 true Chr11: 6215803-6227030 Phaseolus vulgaris
Phvul.011G069400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6226031-6227030 Phaseolus vulgaris
Phvul.011G069400 1.0kb downstream 1.0kb downstream 11228 true Chr11: 6214803-6226030 Phaseolus vulgaris
Phvul.011G069400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6214803-6215802 Phaseolus vulgaris
Phvul.011G069400 2.0kb upstream 2.0kb upstream 12228 true Chr11: 6215803-6228030 Phaseolus vulgaris
Phvul.011G069400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6226031-6228030 Phaseolus vulgaris
Phvul.011G069400 2.0kb downstream 2.0kb downstream 12228 true Chr11: 6213803-6226030 Phaseolus vulgaris
Phvul.011G069400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6213803-6215802 Phaseolus vulgaris
Phvul.011G069400 5.0kb upstream 5.0kb upstream 15228 true Chr11: 6215803-6231030 Phaseolus vulgaris
Phvul.011G069400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6226031-6231030 Phaseolus vulgaris
Phvul.011G069400 5.0kb downstream 5.0kb downstream 15228 true Chr11: 6210803-6226030 Phaseolus vulgaris
Phvul.011G069400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6210803-6215802 Phaseolus vulgaris
Phvul.011G069400 10.0kb upstream 10.0kb upstream 20228 true Chr11: 6215803-6236030 Phaseolus vulgaris
Phvul.011G069400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6226031-6236030 Phaseolus vulgaris
Phvul.011G069400 10.0kb downstream 10.0kb downstream 20228 true Chr11: 6205803-6226030 Phaseolus vulgaris
Phvul.011G069400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6205803-6215802 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301060 5265 Fabidae View MSA
124067266 5270 Rosid View MSA
123746622 5271 Pentapetalae View MSA
122792157 5272 Eudicot View MSA
122049800 5273 Angiosperm View MSA
121348841 5274 Embryophyte View MSA
123428233 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2388 0.0 43.1347   Low
cufflinks 18.0918 0.0 57.2483   High
cufflinks 14.1165 0.0 45.12    
cufflinks 14.2368 0.0 50.0701    
cufflinks 14.0741 0.0 49.387    
cufflinks 15.2051 0.0 48.3317    
cufflinks 13.7974 0.0 48.3784    
cufflinks 13.4223 0.0 46.9895    
cufflinks 15.5194 0.0 54.33    
cufflinks 15.4729 0.0 49.1321    
cufflinks 15.0619 0.0 52.4984    

0 Strain