Gene : Phvul.011G069600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR27003:SF94 - RECEPTOR-LIKE PROTEIN KINASE HERK 1 Genomic Order:  717
Name:  ? Phvul.011G069600 Secondary Identifier:  ? PAC:37156975
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G069600 0.5kb upstream 0.5kb upstream 4084 true Chr11: 6245079-6249162 Phaseolus vulgaris
Phvul.011G069600 0.5kb upstream 0.5kb upstream 500 false Chr11: 6245079-6245578 Phaseolus vulgaris
Phvul.011G069600 0.5kb downstream 0.5kb downstream 4084 true Chr11: 6245579-6249662 Phaseolus vulgaris
Phvul.011G069600 0.5kb downstream 0.5kb downstream 500 false Chr11: 6249163-6249662 Phaseolus vulgaris
Phvul.011G069600 1.0kb upstream 1.0kb upstream 4584 true Chr11: 6244579-6249162 Phaseolus vulgaris
Phvul.011G069600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6244579-6245578 Phaseolus vulgaris
Phvul.011G069600 1.0kb downstream 1.0kb downstream 4584 true Chr11: 6245579-6250162 Phaseolus vulgaris
Phvul.011G069600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6249163-6250162 Phaseolus vulgaris
Phvul.011G069600 2.0kb upstream 2.0kb upstream 5584 true Chr11: 6243579-6249162 Phaseolus vulgaris
Phvul.011G069600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6243579-6245578 Phaseolus vulgaris
Phvul.011G069600 2.0kb downstream 2.0kb downstream 5584 true Chr11: 6245579-6251162 Phaseolus vulgaris
Phvul.011G069600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6249163-6251162 Phaseolus vulgaris
Phvul.011G069600 5.0kb upstream 5.0kb upstream 8584 true Chr11: 6240579-6249162 Phaseolus vulgaris
Phvul.011G069600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6240579-6245578 Phaseolus vulgaris
Phvul.011G069600 5.0kb downstream 5.0kb downstream 8584 true Chr11: 6245579-6254162 Phaseolus vulgaris
Phvul.011G069600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6249163-6254162 Phaseolus vulgaris
Phvul.011G069600 10.0kb upstream 10.0kb upstream 13584 true Chr11: 6235579-6249162 Phaseolus vulgaris
Phvul.011G069600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6235579-6245578 Phaseolus vulgaris
Phvul.011G069600 10.0kb downstream 10.0kb downstream 13584 true Chr11: 6245579-6259162 Phaseolus vulgaris
Phvul.011G069600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6249163-6259162 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310604 5265 Fabidae View MSA
124074134 5270 Rosid View MSA
123748316 5271 Pentapetalae View MSA
122789518 5272 Eudicot View MSA
122044350 5273 Angiosperm View MSA
121310282 5274 Embryophyte View MSA
123347811 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.75142 0.0 15.3818    
cufflinks 8.85234 0.0 23.0955    
cufflinks 3.12761 0.0 8.80384   Low
cufflinks 8.8204 0.0 23.0934    
cufflinks 4.36474 0.0 12.0187    
cufflinks 6.65874 0.0 17.6446    
cufflinks 5.22434 0.0 14.1059    
cufflinks 5.72402 0.0 15.278    
cufflinks 6.04268 0.0 16.1746    
cufflinks 24.6534 0.0 64.6601   High
cufflinks 6.16239 0.0 16.4859    

0 Strain