Gene : Phvul.L009343 P. vulgaris v2.1
Defline:  (1 of 4) PTHR24012:SF333 - POLYADENYLATE-BINDING PROTEIN RBP45B-RELATED Genomic Order:  78
Name:  ? Phvul.L009343 Secondary Identifier:  ? PAC:37178889
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L009343 0.5kb upstream 0.5kb upstream 3582 true scaffold_15: 625594-629175 Phaseolus vulgaris
Phvul.L009343 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 628676-629175 Phaseolus vulgaris
Phvul.L009343 0.5kb downstream 0.5kb downstream 3582 true scaffold_15: 625094-628675 Phaseolus vulgaris
Phvul.L009343 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 625094-625593 Phaseolus vulgaris
Phvul.L009343 1.0kb upstream 1.0kb upstream 4082 true scaffold_15: 625594-629675 Phaseolus vulgaris
Phvul.L009343 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 628676-629675 Phaseolus vulgaris
Phvul.L009343 1.0kb downstream 1.0kb downstream 4082 true scaffold_15: 624594-628675 Phaseolus vulgaris
Phvul.L009343 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 624594-625593 Phaseolus vulgaris
Phvul.L009343 2.0kb upstream 2.0kb upstream 5082 true scaffold_15: 625594-630675 Phaseolus vulgaris
Phvul.L009343 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 628676-630675 Phaseolus vulgaris
Phvul.L009343 2.0kb downstream 2.0kb downstream 5082 true scaffold_15: 623594-628675 Phaseolus vulgaris
Phvul.L009343 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 623594-625593 Phaseolus vulgaris
Phvul.L009343 5.0kb upstream 5.0kb upstream 8082 true scaffold_15: 625594-633675 Phaseolus vulgaris
Phvul.L009343 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 628676-633675 Phaseolus vulgaris
Phvul.L009343 5.0kb downstream 5.0kb downstream 8082 true scaffold_15: 620594-628675 Phaseolus vulgaris
Phvul.L009343 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 620594-625593 Phaseolus vulgaris
Phvul.L009343 10.0kb upstream 10.0kb upstream 13082 true scaffold_15: 625594-638675 Phaseolus vulgaris
Phvul.L009343 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 628676-638675 Phaseolus vulgaris
Phvul.L009343 10.0kb downstream 10.0kb downstream 13082 true scaffold_15: 615594-628675 Phaseolus vulgaris
Phvul.L009343 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 615594-625593 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299663 5265 Fabidae View MSA
124067099 5270 Rosid View MSA
123736996 5271 Pentapetalae View MSA
122788045 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.68905 0.0 21.0158   Low
cufflinks 11.6428 0.0 30.8283    
cufflinks 17.4158 0.0 45.2847   High
cufflinks 11.4162 0.0 30.1526    
cufflinks 14.9752 0.0 39.061    
cufflinks 12.2937 0.0 32.438    
cufflinks 8.04456 0.0 21.7516   Low
cufflinks 9.30414 0.0 24.9987    
cufflinks 7.90223 0.0 21.4125   Low
cufflinks 17.769 0.0 46.1051   High
cufflinks 16.1066 0.0 41.862   High

0 Strain