Gene : Phvul.011G072800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31189:SF2 - CUPIN DOMAIN-CONTAINING PROTEIN Genomic Order:  749
Name:  ? Phvul.011G072800 Secondary Identifier:  ? PAC:37157186
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G072800 0.5kb upstream 0.5kb upstream 3410 true Chr11: 6714587-6717996 Phaseolus vulgaris
Phvul.011G072800 0.5kb upstream 0.5kb upstream 500 false Chr11: 6714587-6715086 Phaseolus vulgaris
Phvul.011G072800 0.5kb downstream 0.5kb downstream 3410 true Chr11: 6715087-6718496 Phaseolus vulgaris
Phvul.011G072800 0.5kb downstream 0.5kb downstream 500 false Chr11: 6717997-6718496 Phaseolus vulgaris
Phvul.011G072800 1.0kb upstream 1.0kb upstream 3910 true Chr11: 6714087-6717996 Phaseolus vulgaris
Phvul.011G072800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6714087-6715086 Phaseolus vulgaris
Phvul.011G072800 1.0kb downstream 1.0kb downstream 3910 true Chr11: 6715087-6718996 Phaseolus vulgaris
Phvul.011G072800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6717997-6718996 Phaseolus vulgaris
Phvul.011G072800 2.0kb upstream 2.0kb upstream 4910 true Chr11: 6713087-6717996 Phaseolus vulgaris
Phvul.011G072800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6713087-6715086 Phaseolus vulgaris
Phvul.011G072800 2.0kb downstream 2.0kb downstream 4910 true Chr11: 6715087-6719996 Phaseolus vulgaris
Phvul.011G072800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6717997-6719996 Phaseolus vulgaris
Phvul.011G072800 5.0kb upstream 5.0kb upstream 7910 true Chr11: 6710087-6717996 Phaseolus vulgaris
Phvul.011G072800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6710087-6715086 Phaseolus vulgaris
Phvul.011G072800 5.0kb downstream 5.0kb downstream 7910 true Chr11: 6715087-6722996 Phaseolus vulgaris
Phvul.011G072800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6717997-6722996 Phaseolus vulgaris
Phvul.011G072800 10.0kb upstream 10.0kb upstream 12910 true Chr11: 6705087-6717996 Phaseolus vulgaris
Phvul.011G072800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6705087-6715086 Phaseolus vulgaris
Phvul.011G072800 10.0kb downstream 10.0kb downstream 12910 true Chr11: 6715087-6727996 Phaseolus vulgaris
Phvul.011G072800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6717997-6727996 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313919 5265 Fabidae View MSA
124068702 5270 Rosid View MSA
123752379 5271 Pentapetalae View MSA
122792319 5272 Eudicot View MSA
122046827 5273 Angiosperm View MSA
121310665 5274 Embryophyte View MSA
123348093 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.194647 0.0 0.774973 Low  
cufflinks 0.507777 0.0 1.87213    
cufflinks 0.292201 0.0 1.12369 Low  
cufflinks 0.341532 0.0 1.30792 Low  
cufflinks 0.174277 0.0 0.704453 Low  
cufflinks 0.589741 0.0 2.14265   High
cufflinks 0.105389 0.0 0.439949 Low Low
cufflinks 0.15382 0.0 0.621625 Low  
cufflinks 0.0463216 0.0 0.209304 Low Low
cufflinks 0.638097 0.0 2.30968   High
cufflinks 0.401849 0.0 1.51622 Low  

0 Strain