Gene : Phvul.011G071900 P. vulgaris v2.1
Defline:  (1 of 10) PTHR31992:SF8 - DOF ZINC FINGER PROTEIN DOF1.1-RELATED Genomic Order:  740
Name:  ? Phvul.011G071900 Secondary Identifier:  ? PAC:37154882
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G071900 0.5kb upstream 0.5kb upstream 2445 true Chr11: 6591626-6594070 Phaseolus vulgaris
Phvul.011G071900 0.5kb upstream 0.5kb upstream 500 false Chr11: 6591626-6592125 Phaseolus vulgaris
Phvul.011G071900 0.5kb downstream 0.5kb downstream 2445 true Chr11: 6592126-6594570 Phaseolus vulgaris
Phvul.011G071900 0.5kb downstream 0.5kb downstream 500 false Chr11: 6594071-6594570 Phaseolus vulgaris
Phvul.011G071900 1.0kb upstream 1.0kb upstream 2945 true Chr11: 6591126-6594070 Phaseolus vulgaris
Phvul.011G071900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6591126-6592125 Phaseolus vulgaris
Phvul.011G071900 1.0kb downstream 1.0kb downstream 2945 true Chr11: 6592126-6595070 Phaseolus vulgaris
Phvul.011G071900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6594071-6595070 Phaseolus vulgaris
Phvul.011G071900 2.0kb upstream 2.0kb upstream 3945 true Chr11: 6590126-6594070 Phaseolus vulgaris
Phvul.011G071900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6590126-6592125 Phaseolus vulgaris
Phvul.011G071900 2.0kb downstream 2.0kb downstream 3945 true Chr11: 6592126-6596070 Phaseolus vulgaris
Phvul.011G071900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6594071-6596070 Phaseolus vulgaris
Phvul.011G071900 5.0kb upstream 5.0kb upstream 6945 true Chr11: 6587126-6594070 Phaseolus vulgaris
Phvul.011G071900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6587126-6592125 Phaseolus vulgaris
Phvul.011G071900 5.0kb downstream 5.0kb downstream 6945 true Chr11: 6592126-6599070 Phaseolus vulgaris
Phvul.011G071900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6594071-6599070 Phaseolus vulgaris
Phvul.011G071900 10.0kb upstream 10.0kb upstream 11945 true Chr11: 6582126-6594070 Phaseolus vulgaris
Phvul.011G071900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6582126-6592125 Phaseolus vulgaris
Phvul.011G071900 10.0kb downstream 10.0kb downstream 11945 true Chr11: 6592126-6604070 Phaseolus vulgaris
Phvul.011G071900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6594071-6604070 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306916 5265 Fabidae View MSA
124067920 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.60745 0.0 16.1963    
cufflinks 18.2658 0.0 47.8036    
cufflinks 7.21776 0.0 20.2775    
cufflinks 4.66614 0.0 13.8067   Low
cufflinks 11.3939 0.0 30.8909    
cufflinks 13.9922 0.0 37.226    
cufflinks 10.7587 0.0 29.1223    
cufflinks 3.96975 0.0 11.8525   Low
cufflinks 9.71074 0.0 26.5122    
cufflinks 32.6577 0.0 84.4177   High
cufflinks 12.3532 0.0 33.2494    

0 Strain