Gene : Phvul.011G061900 P. vulgaris v2.1
Genomic Order:  639 Name:  ? Phvul.011G061900
Secondary Identifier:  ? PAC:37155817
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G061900 0.5kb upstream 0.5kb upstream 2371 true Chr11: 5530466-5532836 Phaseolus vulgaris
Phvul.011G061900 0.5kb upstream 0.5kb upstream 500 false Chr11: 5532337-5532836 Phaseolus vulgaris
Phvul.011G061900 0.5kb downstream 0.5kb downstream 2371 true Chr11: 5529966-5532336 Phaseolus vulgaris
Phvul.011G061900 0.5kb downstream 0.5kb downstream 500 false Chr11: 5529966-5530465 Phaseolus vulgaris
Phvul.011G061900 1.0kb upstream 1.0kb upstream 2871 true Chr11: 5530466-5533336 Phaseolus vulgaris
Phvul.011G061900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5532337-5533336 Phaseolus vulgaris
Phvul.011G061900 1.0kb downstream 1.0kb downstream 2871 true Chr11: 5529466-5532336 Phaseolus vulgaris
Phvul.011G061900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5529466-5530465 Phaseolus vulgaris
Phvul.011G061900 2.0kb upstream 2.0kb upstream 3871 true Chr11: 5530466-5534336 Phaseolus vulgaris
Phvul.011G061900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5532337-5534336 Phaseolus vulgaris
Phvul.011G061900 2.0kb downstream 2.0kb downstream 3871 true Chr11: 5528466-5532336 Phaseolus vulgaris
Phvul.011G061900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5528466-5530465 Phaseolus vulgaris
Phvul.011G061900 5.0kb upstream 5.0kb upstream 6871 true Chr11: 5530466-5537336 Phaseolus vulgaris
Phvul.011G061900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5532337-5537336 Phaseolus vulgaris
Phvul.011G061900 5.0kb downstream 5.0kb downstream 6871 true Chr11: 5525466-5532336 Phaseolus vulgaris
Phvul.011G061900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5525466-5530465 Phaseolus vulgaris
Phvul.011G061900 10.0kb upstream 10.0kb upstream 11871 true Chr11: 5530466-5542336 Phaseolus vulgaris
Phvul.011G061900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5532337-5542336 Phaseolus vulgaris
Phvul.011G061900 10.0kb downstream 10.0kb downstream 11871 true Chr11: 5520466-5532336 Phaseolus vulgaris
Phvul.011G061900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5520466-5530465 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304793 5265 Fabidae View MSA
124074945 5270 Rosid View MSA
123744651 5271 Pentapetalae View MSA
122789630 5272 Eudicot View MSA
122050504 5273 Angiosperm View MSA
121311951 5274 Embryophyte View MSA
123349176 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0482556 0.0 0.222115 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.69103 0.0 11.1519   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0126772 0.0 0.0678088 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain