Gene : Phvul.L001740 P. vulgaris v2.1
Defline:  (1 of 4) K02892 - large subunit ribosomal protein L23 (RP-L23, MRPL23, rplW) Genomic Order:  2
Name:  ? Phvul.L001740 Secondary Identifier:  ? PAC:37157474
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001740 0.5kb upstream 0.5kb upstream 5543 true scaffold_138: 10551-16093 Phaseolus vulgaris
Phvul.L001740 0.5kb upstream 0.5kb upstream 500 false scaffold_138: 15594-16093 Phaseolus vulgaris
Phvul.L001740 0.5kb downstream 0.5kb downstream 5543 true scaffold_138: 10051-15593 Phaseolus vulgaris
Phvul.L001740 0.5kb downstream 0.5kb downstream 500 false scaffold_138: 10051-10550 Phaseolus vulgaris
Phvul.L001740 1.0kb upstream 1.0kb upstream 6043 true scaffold_138: 10551-16593 Phaseolus vulgaris
Phvul.L001740 1.0kb upstream 1.0kb upstream 1000 false scaffold_138: 15594-16593 Phaseolus vulgaris
Phvul.L001740 1.0kb downstream 1.0kb downstream 6043 true scaffold_138: 9551-15593 Phaseolus vulgaris
Phvul.L001740 1.0kb downstream 1.0kb downstream 1000 false scaffold_138: 9551-10550 Phaseolus vulgaris
Phvul.L001740 2.0kb upstream 2.0kb upstream 7043 true scaffold_138: 10551-17593 Phaseolus vulgaris
Phvul.L001740 2.0kb upstream 2.0kb upstream 2000 false scaffold_138: 15594-17593 Phaseolus vulgaris
Phvul.L001740 2.0kb downstream 2.0kb downstream 7043 true scaffold_138: 8551-15593 Phaseolus vulgaris
Phvul.L001740 2.0kb downstream 2.0kb downstream 2000 false scaffold_138: 8551-10550 Phaseolus vulgaris
Phvul.L001740 5.0kb upstream 5.0kb upstream 10043 true scaffold_138: 10551-20593 Phaseolus vulgaris
Phvul.L001740 5.0kb upstream 5.0kb upstream 5000 false scaffold_138: 15594-20593 Phaseolus vulgaris
Phvul.L001740 5.0kb downstream 5.0kb downstream 10043 true scaffold_138: 5551-15593 Phaseolus vulgaris
Phvul.L001740 5.0kb downstream 5.0kb downstream 5000 false scaffold_138: 5551-10550 Phaseolus vulgaris
Phvul.L001740 10.0kb upstream 10.0kb upstream 15043 true scaffold_138: 10551-25593 Phaseolus vulgaris
Phvul.L001740 10.0kb upstream 10.0kb upstream 10000 false scaffold_138: 15594-25593 Phaseolus vulgaris
Phvul.L001740 10.0kb downstream 10.0kb downstream 15043 true scaffold_138: 551-15593 Phaseolus vulgaris
Phvul.L001740 10.0kb downstream 10.0kb downstream 10000 false scaffold_138: 551-10550 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299568 5265 Fabidae View MSA
124068912 5270 Rosid View MSA
123740865 5271 Pentapetalae View MSA
122789044 5272 Eudicot View MSA
122044444 5273 Angiosperm View MSA
121349805 5274 Embryophyte View MSA
123426659 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.34922 0.0 9.80486   Low
cufflinks 4.01218 0.0 11.5302   Low
cufflinks 4.37391 0.0 12.4486    
cufflinks 5.26812 0.0 14.8258    
cufflinks 6.79715 0.0 18.7328    
cufflinks 4.54264 0.0 12.8801    
cufflinks 6.07527 0.0 16.741    
cufflinks 5.71667 0.0 15.7968    
cufflinks 8.80164 0.0 23.5572   High
cufflinks 5.72061 0.0 15.9155    
cufflinks 5.61158 0.0 15.6709    

0 Strain