Gene : Phvul.011G062100 P. vulgaris v2.1
Defline:  (1 of 287) PF00249 - Myb-like DNA-binding domain (Myb_DNA-binding) Genomic Order:  641
Name:  ? Phvul.011G062100 Secondary Identifier:  ? PAC:37156148
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G062100 0.5kb upstream 0.5kb upstream 3226 true Chr11: 5536783-5540008 Phaseolus vulgaris
Phvul.011G062100 0.5kb upstream 0.5kb upstream 500 false Chr11: 5539509-5540008 Phaseolus vulgaris
Phvul.011G062100 0.5kb downstream 0.5kb downstream 3226 true Chr11: 5536283-5539508 Phaseolus vulgaris
Phvul.011G062100 0.5kb downstream 0.5kb downstream 500 false Chr11: 5536283-5536782 Phaseolus vulgaris
Phvul.011G062100 1.0kb upstream 1.0kb upstream 3726 true Chr11: 5536783-5540508 Phaseolus vulgaris
Phvul.011G062100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5539509-5540508 Phaseolus vulgaris
Phvul.011G062100 1.0kb downstream 1.0kb downstream 3726 true Chr11: 5535783-5539508 Phaseolus vulgaris
Phvul.011G062100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5535783-5536782 Phaseolus vulgaris
Phvul.011G062100 2.0kb upstream 2.0kb upstream 4726 true Chr11: 5536783-5541508 Phaseolus vulgaris
Phvul.011G062100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5539509-5541508 Phaseolus vulgaris
Phvul.011G062100 2.0kb downstream 2.0kb downstream 4726 true Chr11: 5534783-5539508 Phaseolus vulgaris
Phvul.011G062100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5534783-5536782 Phaseolus vulgaris
Phvul.011G062100 5.0kb upstream 5.0kb upstream 7726 true Chr11: 5536783-5544508 Phaseolus vulgaris
Phvul.011G062100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5539509-5544508 Phaseolus vulgaris
Phvul.011G062100 5.0kb downstream 5.0kb downstream 7726 true Chr11: 5531783-5539508 Phaseolus vulgaris
Phvul.011G062100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5531783-5536782 Phaseolus vulgaris
Phvul.011G062100 10.0kb upstream 10.0kb upstream 12726 true Chr11: 5536783-5549508 Phaseolus vulgaris
Phvul.011G062100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5539509-5549508 Phaseolus vulgaris
Phvul.011G062100 10.0kb downstream 10.0kb downstream 12726 true Chr11: 5526783-5539508 Phaseolus vulgaris
Phvul.011G062100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5526783-5536782 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300127 5265 Fabidae View MSA
124067582 5270 Rosid View MSA
123746852 5271 Pentapetalae View MSA
122794085 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.397 0.0 68.325   High
cufflinks 5.34479 0.0 15.0415    
cufflinks 2.15175 0.0 6.73198   Low
cufflinks 17.8555 0.0 46.2252   High
cufflinks 3.40499 0.0 9.95918    
cufflinks 2.61917 0.0 7.96147    
cufflinks 2.66884 0.0 8.01803    
cufflinks 3.15745 0.0 9.3889    
cufflinks 5.4816 0.0 15.2942    
cufflinks 5.50617 0.0 15.4187    
cufflinks 5.79577 0.0 16.1019    

0 Strain