Gene : Phvul.L001840 P. vulgaris v2.1
Defline:  (1 of 25) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  3
Name:  ? Phvul.L001840 Secondary Identifier:  ? PAC:37157477
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001840 0.5kb upstream 0.5kb upstream 1549 true scaffold_138: 21231-22779 Phaseolus vulgaris
Phvul.L001840 0.5kb upstream 0.5kb upstream 500 false scaffold_138: 22280-22779 Phaseolus vulgaris
Phvul.L001840 0.5kb downstream 0.5kb downstream 1549 true scaffold_138: 20731-22279 Phaseolus vulgaris
Phvul.L001840 0.5kb downstream 0.5kb downstream 500 false scaffold_138: 20731-21230 Phaseolus vulgaris
Phvul.L001840 1.0kb upstream 1.0kb upstream 2049 true scaffold_138: 21231-23279 Phaseolus vulgaris
Phvul.L001840 1.0kb upstream 1.0kb upstream 1000 false scaffold_138: 22280-23279 Phaseolus vulgaris
Phvul.L001840 1.0kb downstream 1.0kb downstream 2049 true scaffold_138: 20231-22279 Phaseolus vulgaris
Phvul.L001840 1.0kb downstream 1.0kb downstream 1000 false scaffold_138: 20231-21230 Phaseolus vulgaris
Phvul.L001840 2.0kb upstream 2.0kb upstream 3049 true scaffold_138: 21231-24279 Phaseolus vulgaris
Phvul.L001840 2.0kb upstream 2.0kb upstream 2000 false scaffold_138: 22280-24279 Phaseolus vulgaris
Phvul.L001840 2.0kb downstream 2.0kb downstream 3049 true scaffold_138: 19231-22279 Phaseolus vulgaris
Phvul.L001840 2.0kb downstream 2.0kb downstream 2000 false scaffold_138: 19231-21230 Phaseolus vulgaris
Phvul.L001840 5.0kb upstream 5.0kb upstream 6049 true scaffold_138: 21231-27279 Phaseolus vulgaris
Phvul.L001840 5.0kb upstream 5.0kb upstream 5000 false scaffold_138: 22280-27279 Phaseolus vulgaris
Phvul.L001840 5.0kb downstream 5.0kb downstream 6049 true scaffold_138: 16231-22279 Phaseolus vulgaris
Phvul.L001840 5.0kb downstream 5.0kb downstream 5000 false scaffold_138: 16231-21230 Phaseolus vulgaris
Phvul.L001840 10.0kb upstream 10.0kb upstream 11049 true scaffold_138: 21231-32279 Phaseolus vulgaris
Phvul.L001840 10.0kb upstream 10.0kb upstream 10000 false scaffold_138: 22280-32279 Phaseolus vulgaris
Phvul.L001840 10.0kb downstream 10.0kb downstream 11049 true scaffold_138: 11231-22279 Phaseolus vulgaris
Phvul.L001840 10.0kb downstream 10.0kb downstream 10000 false scaffold_138: 11231-21230 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.103729 0.0 0.462684 Low  
cufflinks 0.0610944 0.0 0.286939 Low Low
cufflinks 0.359701 0.0 1.43455 Low  
cufflinks 0.0242377 0.0 0.125381 Low Low
cufflinks 7.129 0.0 21.3607    
cufflinks 0.421323 0.0 1.65846 Low  
cufflinks 12.8022 0.0 35.7063   High
cufflinks 1.91638 0.0 6.60632    
cufflinks 3.86889 0.0 12.2697    
cufflinks 0.240153 0.0 0.993724 Low  
cufflinks 30.4373 0.0 79.842   High

0 Strain