Gene : Phvul.011G059600 P. vulgaris v2.1
Defline:  (1 of 1) 2.8.1.4//2.8.1.7 - Cysteine desulfurase / Cysteine desulfurylase Genomic Order:  616
Name:  ? Phvul.011G059600 Secondary Identifier:  ? PAC:37157303
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1021 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6823 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7250 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G059600 0.5kb upstream 0.5kb upstream 4236 true Chr11: 5342940-5347175 Phaseolus vulgaris
Phvul.011G059600 0.5kb upstream 0.5kb upstream 500 false Chr11: 5346676-5347175 Phaseolus vulgaris
Phvul.011G059600 0.5kb downstream 0.5kb downstream 4236 true Chr11: 5342440-5346675 Phaseolus vulgaris
Phvul.011G059600 0.5kb downstream 0.5kb downstream 500 false Chr11: 5342440-5342939 Phaseolus vulgaris
Phvul.011G059600 1.0kb upstream 1.0kb upstream 4736 true Chr11: 5342940-5347675 Phaseolus vulgaris
Phvul.011G059600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5346676-5347675 Phaseolus vulgaris
Phvul.011G059600 1.0kb downstream 1.0kb downstream 4736 true Chr11: 5341940-5346675 Phaseolus vulgaris
Phvul.011G059600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5341940-5342939 Phaseolus vulgaris
Phvul.011G059600 2.0kb upstream 2.0kb upstream 5736 true Chr11: 5342940-5348675 Phaseolus vulgaris
Phvul.011G059600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5346676-5348675 Phaseolus vulgaris
Phvul.011G059600 2.0kb downstream 2.0kb downstream 5736 true Chr11: 5340940-5346675 Phaseolus vulgaris
Phvul.011G059600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5340940-5342939 Phaseolus vulgaris
Phvul.011G059600 5.0kb upstream 5.0kb upstream 8736 true Chr11: 5342940-5351675 Phaseolus vulgaris
Phvul.011G059600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5346676-5351675 Phaseolus vulgaris
Phvul.011G059600 5.0kb downstream 5.0kb downstream 8736 true Chr11: 5337940-5346675 Phaseolus vulgaris
Phvul.011G059600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5337940-5342939 Phaseolus vulgaris
Phvul.011G059600 10.0kb upstream 10.0kb upstream 13736 true Chr11: 5342940-5356675 Phaseolus vulgaris
Phvul.011G059600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5346676-5356675 Phaseolus vulgaris
Phvul.011G059600 10.0kb downstream 10.0kb downstream 13736 true Chr11: 5332940-5346675 Phaseolus vulgaris
Phvul.011G059600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5332940-5342939 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300417 5265 Fabidae View MSA
124061540 5270 Rosid View MSA
123736557 5271 Pentapetalae View MSA
122792411 5272 Eudicot View MSA
122044530 5273 Angiosperm View MSA
121345192 5274 Embryophyte View MSA
123427133 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3034 0.0 36.3621    
cufflinks 13.2488 0.0 38.8315    
cufflinks 25.0809 0.0 82.8242   High
cufflinks 9.7981 0.0 34.9707    
cufflinks 9.51581 0.0 31.0291    
cufflinks 16.3053 0.0 53.3751    
cufflinks 5.8544 0.0 20.7101   Low
cufflinks 6.41457 0.0 21.3357    
cufflinks 5.07344 0.0 17.9288   Low
cufflinks 16.0704 0.0 47.8555    
cufflinks 7.48684 0.0 25.401    

0 Strain