Gene : Phvul.011G060400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12483//PTHR12483:SF45 - SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS // SUBFAMILY NOT NAMED Genomic Order:  624
Name:  ? Phvul.011G060400 Secondary Identifier:  ? PAC:37157410
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G060400 0.5kb upstream 0.5kb upstream 1316 true Chr11: 5423148-5424463 Phaseolus vulgaris
Phvul.011G060400 0.5kb upstream 0.5kb upstream 500 false Chr11: 5423148-5423647 Phaseolus vulgaris
Phvul.011G060400 0.5kb downstream 0.5kb downstream 1316 true Chr11: 5423648-5424963 Phaseolus vulgaris
Phvul.011G060400 0.5kb downstream 0.5kb downstream 500 false Chr11: 5424464-5424963 Phaseolus vulgaris
Phvul.011G060400 1.0kb upstream 1.0kb upstream 1816 true Chr11: 5422648-5424463 Phaseolus vulgaris
Phvul.011G060400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5422648-5423647 Phaseolus vulgaris
Phvul.011G060400 1.0kb downstream 1.0kb downstream 1816 true Chr11: 5423648-5425463 Phaseolus vulgaris
Phvul.011G060400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5424464-5425463 Phaseolus vulgaris
Phvul.011G060400 2.0kb upstream 2.0kb upstream 2816 true Chr11: 5421648-5424463 Phaseolus vulgaris
Phvul.011G060400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5421648-5423647 Phaseolus vulgaris
Phvul.011G060400 2.0kb downstream 2.0kb downstream 2816 true Chr11: 5423648-5426463 Phaseolus vulgaris
Phvul.011G060400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5424464-5426463 Phaseolus vulgaris
Phvul.011G060400 5.0kb upstream 5.0kb upstream 5816 true Chr11: 5418648-5424463 Phaseolus vulgaris
Phvul.011G060400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5418648-5423647 Phaseolus vulgaris
Phvul.011G060400 5.0kb downstream 5.0kb downstream 5816 true Chr11: 5423648-5429463 Phaseolus vulgaris
Phvul.011G060400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5424464-5429463 Phaseolus vulgaris
Phvul.011G060400 10.0kb upstream 10.0kb upstream 10816 true Chr11: 5413648-5424463 Phaseolus vulgaris
Phvul.011G060400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5413648-5423647 Phaseolus vulgaris
Phvul.011G060400 10.0kb downstream 10.0kb downstream 10816 true Chr11: 5423648-5434463 Phaseolus vulgaris
Phvul.011G060400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5424464-5434463 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307287 5265 Fabidae View MSA
124073752 5270 Rosid View MSA
123753220 5271 Pentapetalae View MSA
122794741 5272 Eudicot View MSA
122045101 5273 Angiosperm View MSA
121351716 5274 Embryophyte View MSA
123428463 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.53594 0.0 5.704    
cufflinks 1.97803 0.0 7.18791    
cufflinks 0.892265 0.0 3.46309    
cufflinks 0.802949 0.0 3.13603    
cufflinks 0.805312 0.0 3.13801    
cufflinks 0.168178 0.0 0.754782 Low Low
cufflinks 22.081 0.0 61.629   High
cufflinks 25.8501 0.0 71.2136   High
cufflinks 96.1183 0.0 248.49 High High
cufflinks 1.30038 0.0 4.88827    
cufflinks 0.437656 0.0 1.79381 Low  

0 Strain