Gene : Phvul.011G060500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12483//PTHR12483:SF45 - SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS // SUBFAMILY NOT NAMED Genomic Order:  625
Name:  ? Phvul.011G060500 Secondary Identifier:  ? PAC:37156345
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G060500 0.5kb upstream 0.5kb upstream 1181 true Chr11: 5427000-5428180 Phaseolus vulgaris
Phvul.011G060500 0.5kb upstream 0.5kb upstream 500 false Chr11: 5427000-5427499 Phaseolus vulgaris
Phvul.011G060500 0.5kb downstream 0.5kb downstream 1181 true Chr11: 5427500-5428680 Phaseolus vulgaris
Phvul.011G060500 0.5kb downstream 0.5kb downstream 500 false Chr11: 5428181-5428680 Phaseolus vulgaris
Phvul.011G060500 1.0kb upstream 1.0kb upstream 1681 true Chr11: 5426500-5428180 Phaseolus vulgaris
Phvul.011G060500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5426500-5427499 Phaseolus vulgaris
Phvul.011G060500 1.0kb downstream 1.0kb downstream 1681 true Chr11: 5427500-5429180 Phaseolus vulgaris
Phvul.011G060500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5428181-5429180 Phaseolus vulgaris
Phvul.011G060500 2.0kb upstream 2.0kb upstream 2681 true Chr11: 5425500-5428180 Phaseolus vulgaris
Phvul.011G060500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5425500-5427499 Phaseolus vulgaris
Phvul.011G060500 2.0kb downstream 2.0kb downstream 2681 true Chr11: 5427500-5430180 Phaseolus vulgaris
Phvul.011G060500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5428181-5430180 Phaseolus vulgaris
Phvul.011G060500 5.0kb upstream 5.0kb upstream 5681 true Chr11: 5422500-5428180 Phaseolus vulgaris
Phvul.011G060500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5422500-5427499 Phaseolus vulgaris
Phvul.011G060500 5.0kb downstream 5.0kb downstream 5681 true Chr11: 5427500-5433180 Phaseolus vulgaris
Phvul.011G060500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5428181-5433180 Phaseolus vulgaris
Phvul.011G060500 10.0kb upstream 10.0kb upstream 10681 true Chr11: 5417500-5428180 Phaseolus vulgaris
Phvul.011G060500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5417500-5427499 Phaseolus vulgaris
Phvul.011G060500 10.0kb downstream 10.0kb downstream 10681 true Chr11: 5427500-5438180 Phaseolus vulgaris
Phvul.011G060500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5428181-5438180 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307287 5265 Fabidae View MSA
124073752 5270 Rosid View MSA
123753220 5271 Pentapetalae View MSA
122794741 5272 Eudicot View MSA
122045101 5273 Angiosperm View MSA
121351716 5274 Embryophyte View MSA
123428463 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.3088 0.0 98.3483 High  
cufflinks 30.5703 0.0 84.3531    
cufflinks 70.4504 0.0 183.389 High High
cufflinks 20.1948 0.0 57.4528    
cufflinks 16.7295 0.0 48.583    
cufflinks 34.1151 0.0 93.4264 High  
cufflinks 2.80118 0.0 9.98521   Low
cufflinks 16.6062 0.0 48.658    
cufflinks 3.87305 0.0 13.4021   Low
cufflinks 21.7054 0.0 61.5995    
cufflinks 14.7107 0.0 43.4129    

0 Strain