Gene : Phvul.011G064800 P. vulgaris v2.1
Defline:  (1 of 41) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  668
Name:  ? Phvul.011G064800 Secondary Identifier:  ? PAC:37155399
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G064800 0.5kb upstream 0.5kb upstream 3363 true Chr11: 5795623-5798985 Phaseolus vulgaris
Phvul.011G064800 0.5kb upstream 0.5kb upstream 500 false Chr11: 5798486-5798985 Phaseolus vulgaris
Phvul.011G064800 0.5kb downstream 0.5kb downstream 3363 true Chr11: 5795123-5798485 Phaseolus vulgaris
Phvul.011G064800 0.5kb downstream 0.5kb downstream 500 false Chr11: 5795123-5795622 Phaseolus vulgaris
Phvul.011G064800 1.0kb upstream 1.0kb upstream 3863 true Chr11: 5795623-5799485 Phaseolus vulgaris
Phvul.011G064800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5798486-5799485 Phaseolus vulgaris
Phvul.011G064800 1.0kb downstream 1.0kb downstream 3863 true Chr11: 5794623-5798485 Phaseolus vulgaris
Phvul.011G064800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5794623-5795622 Phaseolus vulgaris
Phvul.011G064800 2.0kb upstream 2.0kb upstream 4863 true Chr11: 5795623-5800485 Phaseolus vulgaris
Phvul.011G064800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5798486-5800485 Phaseolus vulgaris
Phvul.011G064800 2.0kb downstream 2.0kb downstream 4863 true Chr11: 5793623-5798485 Phaseolus vulgaris
Phvul.011G064800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5793623-5795622 Phaseolus vulgaris
Phvul.011G064800 5.0kb upstream 5.0kb upstream 7863 true Chr11: 5795623-5803485 Phaseolus vulgaris
Phvul.011G064800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5798486-5803485 Phaseolus vulgaris
Phvul.011G064800 5.0kb downstream 5.0kb downstream 7863 true Chr11: 5790623-5798485 Phaseolus vulgaris
Phvul.011G064800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5790623-5795622 Phaseolus vulgaris
Phvul.011G064800 10.0kb upstream 10.0kb upstream 12863 true Chr11: 5795623-5808485 Phaseolus vulgaris
Phvul.011G064800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5798486-5808485 Phaseolus vulgaris
Phvul.011G064800 10.0kb downstream 10.0kb downstream 12863 true Chr11: 5785623-5798485 Phaseolus vulgaris
Phvul.011G064800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5785623-5795622 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312837 5265 Fabidae View MSA
124069853 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.6406 0.0 48.8798   High
cufflinks 3.45612 0.0 15.1415    
cufflinks 5.7969 0.0 20.4373    
cufflinks 5.52976 0.0 22.534    
cufflinks 7.88995 0.0 28.4967    
cufflinks 5.29407 0.0 19.6786    
cufflinks 12.8094 0.0 41.6834   High
cufflinks 4.10926 0.0 16.8381    
cufflinks 7.97647 0.0 27.9726    
cufflinks 1.33629 0.0 7.6753   Low
cufflinks 9.16967 0.0 31.5909    

0 Strain