Gene : Phvul.L004801 P. vulgaris v2.1
Defline:  (1 of 1) PTHR14571:SF9 - PHD FINGER PROTEIN 13 Genomic Order:  4
Name:  ? Phvul.L004801 Secondary Identifier:  ? PAC:37163944
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L004801 0.5kb upstream 0.5kb upstream 12500 true scaffold_14: 142265-154764 Phaseolus vulgaris
Phvul.L004801 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 142265-142764 Phaseolus vulgaris
Phvul.L004801 0.5kb downstream 0.5kb downstream 12500 true scaffold_14: 142765-155264 Phaseolus vulgaris
Phvul.L004801 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 154765-155264 Phaseolus vulgaris
Phvul.L004801 1.0kb upstream 1.0kb upstream 13000 true scaffold_14: 141765-154764 Phaseolus vulgaris
Phvul.L004801 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 141765-142764 Phaseolus vulgaris
Phvul.L004801 1.0kb downstream 1.0kb downstream 13000 true scaffold_14: 142765-155764 Phaseolus vulgaris
Phvul.L004801 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 154765-155764 Phaseolus vulgaris
Phvul.L004801 2.0kb upstream 2.0kb upstream 14000 true scaffold_14: 140765-154764 Phaseolus vulgaris
Phvul.L004801 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 140765-142764 Phaseolus vulgaris
Phvul.L004801 2.0kb downstream 2.0kb downstream 14000 true scaffold_14: 142765-156764 Phaseolus vulgaris
Phvul.L004801 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 154765-156764 Phaseolus vulgaris
Phvul.L004801 5.0kb upstream 5.0kb upstream 17000 true scaffold_14: 137765-154764 Phaseolus vulgaris
Phvul.L004801 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 137765-142764 Phaseolus vulgaris
Phvul.L004801 5.0kb downstream 5.0kb downstream 17000 true scaffold_14: 142765-159764 Phaseolus vulgaris
Phvul.L004801 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 154765-159764 Phaseolus vulgaris
Phvul.L004801 10.0kb upstream 10.0kb upstream 22000 true scaffold_14: 132765-154764 Phaseolus vulgaris
Phvul.L004801 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 132765-142764 Phaseolus vulgaris
Phvul.L004801 10.0kb downstream 10.0kb downstream 22000 true scaffold_14: 142765-164764 Phaseolus vulgaris
Phvul.L004801 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 154765-164764 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302365 5265 Fabidae View MSA
124061869 5270 Rosid View MSA
123737201 5271 Pentapetalae View MSA
122791412 5272 Eudicot View MSA
122046243 5273 Angiosperm View MSA
121350322 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.13315 0.0 9.72372   Low
cufflinks 8.06504 0.0 22.5043    
cufflinks 11.7391 0.0 37.6203    
cufflinks 2.50669 0.0 8.10284   Low
cufflinks 8.08018 0.0 25.9423    
cufflinks 13.4122 0.0 43.4881    
cufflinks 12.6145 0.0 40.6823    
cufflinks 9.38756 0.0 30.0049    
cufflinks 10.8381 0.0 30.3607    
cufflinks 15.6686 0.0 51.5253   High
cufflinks 7.51314 0.0 24.3751    

0 Strain