Gene : Phvul.L005701 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23322:SF1 - FAS-ASSOCIATED FACTOR 2 Genomic Order:  13
Name:  ? Phvul.L005701 Secondary Identifier:  ? PAC:37163932
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L005701 0.5kb upstream 0.5kb upstream 4375 true scaffold_14: 466368-470742 Phaseolus vulgaris
Phvul.L005701 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 470243-470742 Phaseolus vulgaris
Phvul.L005701 0.5kb downstream 0.5kb downstream 4375 true scaffold_14: 465868-470242 Phaseolus vulgaris
Phvul.L005701 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 465868-466367 Phaseolus vulgaris
Phvul.L005701 1.0kb upstream 1.0kb upstream 4875 true scaffold_14: 466368-471242 Phaseolus vulgaris
Phvul.L005701 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 470243-471242 Phaseolus vulgaris
Phvul.L005701 1.0kb downstream 1.0kb downstream 4875 true scaffold_14: 465368-470242 Phaseolus vulgaris
Phvul.L005701 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 465368-466367 Phaseolus vulgaris
Phvul.L005701 2.0kb upstream 2.0kb upstream 5875 true scaffold_14: 466368-472242 Phaseolus vulgaris
Phvul.L005701 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 470243-472242 Phaseolus vulgaris
Phvul.L005701 2.0kb downstream 2.0kb downstream 5875 true scaffold_14: 464368-470242 Phaseolus vulgaris
Phvul.L005701 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 464368-466367 Phaseolus vulgaris
Phvul.L005701 5.0kb upstream 5.0kb upstream 8875 true scaffold_14: 466368-475242 Phaseolus vulgaris
Phvul.L005701 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 470243-475242 Phaseolus vulgaris
Phvul.L005701 5.0kb downstream 5.0kb downstream 8875 true scaffold_14: 461368-470242 Phaseolus vulgaris
Phvul.L005701 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 461368-466367 Phaseolus vulgaris
Phvul.L005701 10.0kb upstream 10.0kb upstream 13875 true scaffold_14: 466368-480242 Phaseolus vulgaris
Phvul.L005701 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 470243-480242 Phaseolus vulgaris
Phvul.L005701 10.0kb downstream 10.0kb downstream 13875 true scaffold_14: 456368-470242 Phaseolus vulgaris
Phvul.L005701 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 456368-466367 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299435 5265 Fabidae View MSA
124063311 5270 Rosid View MSA
123749858 5271 Pentapetalae View MSA
122791969 5272 Eudicot View MSA
122043233 5273 Angiosperm View MSA
121344275 5274 Embryophyte View MSA
123424827 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.7552 0.0 98.8232 High High
cufflinks 28.8658 0.0 74.8523    
cufflinks 22.8176 0.0 58.9812   Low
cufflinks 37.1949 0.0 97.3844 High High
cufflinks 28.3467 0.0 73.4811    
cufflinks 22.7289 0.0 58.7522   Low
cufflinks 28.911 0.0 75.1128 High  
cufflinks 30.335 0.0 78.8764 High  
cufflinks 30.9569 0.0 80.5384 High  
cufflinks 34.9006 0.0 91.0295    
cufflinks 35.2718 0.0 92.1561 High  

0 Strain