Gene : Phvul.011G063200 P. vulgaris v2.1
Defline:  (1 of 55) PF03514 - GRAS domain family (GRAS) Genomic Order:  652
Name:  ? Phvul.011G063200 Secondary Identifier:  ? PAC:37155449
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G063200 0.5kb upstream 0.5kb upstream 2561 true Chr11: 5644195-5646755 Phaseolus vulgaris
Phvul.011G063200 0.5kb upstream 0.5kb upstream 500 false Chr11: 5646256-5646755 Phaseolus vulgaris
Phvul.011G063200 0.5kb downstream 0.5kb downstream 2561 true Chr11: 5643695-5646255 Phaseolus vulgaris
Phvul.011G063200 0.5kb downstream 0.5kb downstream 500 false Chr11: 5643695-5644194 Phaseolus vulgaris
Phvul.011G063200 1.0kb upstream 1.0kb upstream 3061 true Chr11: 5644195-5647255 Phaseolus vulgaris
Phvul.011G063200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5646256-5647255 Phaseolus vulgaris
Phvul.011G063200 1.0kb downstream 1.0kb downstream 3061 true Chr11: 5643195-5646255 Phaseolus vulgaris
Phvul.011G063200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5643195-5644194 Phaseolus vulgaris
Phvul.011G063200 2.0kb upstream 2.0kb upstream 4061 true Chr11: 5644195-5648255 Phaseolus vulgaris
Phvul.011G063200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5646256-5648255 Phaseolus vulgaris
Phvul.011G063200 2.0kb downstream 2.0kb downstream 4061 true Chr11: 5642195-5646255 Phaseolus vulgaris
Phvul.011G063200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5642195-5644194 Phaseolus vulgaris
Phvul.011G063200 5.0kb upstream 5.0kb upstream 7061 true Chr11: 5644195-5651255 Phaseolus vulgaris
Phvul.011G063200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5646256-5651255 Phaseolus vulgaris
Phvul.011G063200 5.0kb downstream 5.0kb downstream 7061 true Chr11: 5639195-5646255 Phaseolus vulgaris
Phvul.011G063200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5639195-5644194 Phaseolus vulgaris
Phvul.011G063200 10.0kb upstream 10.0kb upstream 12061 true Chr11: 5644195-5656255 Phaseolus vulgaris
Phvul.011G063200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5646256-5656255 Phaseolus vulgaris
Phvul.011G063200 10.0kb downstream 10.0kb downstream 12061 true Chr11: 5634195-5646255 Phaseolus vulgaris
Phvul.011G063200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5634195-5644194 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296556 5265 Fabidae View MSA
124064639 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.23702 0.0 19.7059    
cufflinks 9.57286 0.0 25.5271    
cufflinks 9.23693 0.0 24.6387    
cufflinks 5.59723 0.0 15.6654   Low
cufflinks 8.57927 0.0 23.1299    
cufflinks 7.34617 0.0 19.9998    
cufflinks 8.45153 0.0 22.6906    
cufflinks 7.32338 0.0 19.8814    
cufflinks 7.08025 0.0 19.3304    
cufflinks 11.6487 0.0 30.6896   High
cufflinks 9.71948 0.0 25.9463    

0 Strain