Gene : Phvul.011G066300 P. vulgaris v2.1
Defline:  (1 of 252) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  683
Name:  ? Phvul.011G066300 Secondary Identifier:  ? PAC:37157400
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G066300 0.5kb upstream 0.5kb upstream 2801 true Chr11: 5929777-5932577 Phaseolus vulgaris
Phvul.011G066300 0.5kb upstream 0.5kb upstream 500 false Chr11: 5932078-5932577 Phaseolus vulgaris
Phvul.011G066300 0.5kb downstream 0.5kb downstream 2801 true Chr11: 5929277-5932077 Phaseolus vulgaris
Phvul.011G066300 0.5kb downstream 0.5kb downstream 500 false Chr11: 5929277-5929776 Phaseolus vulgaris
Phvul.011G066300 1.0kb upstream 1.0kb upstream 3301 true Chr11: 5929777-5933077 Phaseolus vulgaris
Phvul.011G066300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5932078-5933077 Phaseolus vulgaris
Phvul.011G066300 1.0kb downstream 1.0kb downstream 3301 true Chr11: 5928777-5932077 Phaseolus vulgaris
Phvul.011G066300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5928777-5929776 Phaseolus vulgaris
Phvul.011G066300 2.0kb upstream 2.0kb upstream 4301 true Chr11: 5929777-5934077 Phaseolus vulgaris
Phvul.011G066300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5932078-5934077 Phaseolus vulgaris
Phvul.011G066300 2.0kb downstream 2.0kb downstream 4301 true Chr11: 5927777-5932077 Phaseolus vulgaris
Phvul.011G066300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5927777-5929776 Phaseolus vulgaris
Phvul.011G066300 5.0kb upstream 5.0kb upstream 7301 true Chr11: 5929777-5937077 Phaseolus vulgaris
Phvul.011G066300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5932078-5937077 Phaseolus vulgaris
Phvul.011G066300 5.0kb downstream 5.0kb downstream 7301 true Chr11: 5924777-5932077 Phaseolus vulgaris
Phvul.011G066300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5924777-5929776 Phaseolus vulgaris
Phvul.011G066300 10.0kb upstream 10.0kb upstream 12301 true Chr11: 5929777-5942077 Phaseolus vulgaris
Phvul.011G066300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5932078-5942077 Phaseolus vulgaris
Phvul.011G066300 10.0kb downstream 10.0kb downstream 12301 true Chr11: 5919777-5932077 Phaseolus vulgaris
Phvul.011G066300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5919777-5929776 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311584 5265 Fabidae View MSA
124062704 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.30002 0.0 15.1327    
cufflinks 3.37415 0.0 15.1093    
cufflinks 3.28888 0.0 14.7937    
cufflinks 6.60923 0.0 25.593   High
cufflinks 3.04711 0.0 14.2929    
cufflinks 3.85998 0.0 16.745    
cufflinks 2.76394 0.0 12.9982    
cufflinks 3.63338 0.0 15.7591    
cufflinks 1.86047 0.0 9.77056   Low
cufflinks 3.53106 0.0 15.6548    
cufflinks 3.1227 0.0 14.3968    

0 Strain