Gene : Phvul.011G066700 P. vulgaris v2.1
Defline:  (1 of 5) K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Genomic Order:  687
Name:  ? Phvul.011G066700 Secondary Identifier:  ? PAC:37156636
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G066700 0.5kb upstream 0.5kb upstream 4239 true Chr11: 5952357-5956595 Phaseolus vulgaris
Phvul.011G066700 0.5kb upstream 0.5kb upstream 500 false Chr11: 5952357-5952856 Phaseolus vulgaris
Phvul.011G066700 0.5kb downstream 0.5kb downstream 4239 true Chr11: 5952857-5957095 Phaseolus vulgaris
Phvul.011G066700 0.5kb downstream 0.5kb downstream 500 false Chr11: 5956596-5957095 Phaseolus vulgaris
Phvul.011G066700 1.0kb upstream 1.0kb upstream 4739 true Chr11: 5951857-5956595 Phaseolus vulgaris
Phvul.011G066700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5951857-5952856 Phaseolus vulgaris
Phvul.011G066700 1.0kb downstream 1.0kb downstream 4739 true Chr11: 5952857-5957595 Phaseolus vulgaris
Phvul.011G066700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5956596-5957595 Phaseolus vulgaris
Phvul.011G066700 2.0kb upstream 2.0kb upstream 5739 true Chr11: 5950857-5956595 Phaseolus vulgaris
Phvul.011G066700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5950857-5952856 Phaseolus vulgaris
Phvul.011G066700 2.0kb downstream 2.0kb downstream 5739 true Chr11: 5952857-5958595 Phaseolus vulgaris
Phvul.011G066700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5956596-5958595 Phaseolus vulgaris
Phvul.011G066700 5.0kb upstream 5.0kb upstream 8739 true Chr11: 5947857-5956595 Phaseolus vulgaris
Phvul.011G066700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5947857-5952856 Phaseolus vulgaris
Phvul.011G066700 5.0kb downstream 5.0kb downstream 8739 true Chr11: 5952857-5961595 Phaseolus vulgaris
Phvul.011G066700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5956596-5961595 Phaseolus vulgaris
Phvul.011G066700 10.0kb upstream 10.0kb upstream 13739 true Chr11: 5942857-5956595 Phaseolus vulgaris
Phvul.011G066700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5942857-5952856 Phaseolus vulgaris
Phvul.011G066700 10.0kb downstream 10.0kb downstream 13739 true Chr11: 5952857-5966595 Phaseolus vulgaris
Phvul.011G066700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5956596-5966595 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314482 5265 Fabidae View MSA
124070106 5270 Rosid View MSA
123750125 5271 Pentapetalae View MSA
122789123 5272 Eudicot View MSA
122050642 5273 Angiosperm View MSA
123429129 5275 Viridiplantae View MSA
121344035 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.6263 0.0 52.1284    
cufflinks 19.0386 0.0 50.7516    
cufflinks 20.329 0.0 53.9582    
cufflinks 27.2338 0.0 71.287   High
cufflinks 18.6572 0.0 50.1639    
cufflinks 13.5707 0.0 37.2027   Low
cufflinks 14.6919 0.0 39.9844   Low
cufflinks 18.017 0.0 48.1341    
cufflinks 17.5547 0.0 47.073    
cufflinks 15.813 0.0 42.7823    
cufflinks 21.3181 0.0 56.6089    

0 Strain