Gene : Phvul.011G067100 P. vulgaris v2.1
Defline:  (1 of 3) K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Genomic Order:  691
Name:  ? Phvul.011G067100 Secondary Identifier:  ? PAC:37155248
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5080 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6433 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6598 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7036 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7601 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7606 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7619 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G067100 0.5kb upstream 0.5kb upstream 4611 true Chr11: 5986561-5991171 Phaseolus vulgaris
Phvul.011G067100 0.5kb upstream 0.5kb upstream 500 false Chr11: 5986561-5987060 Phaseolus vulgaris
Phvul.011G067100 0.5kb downstream 0.5kb downstream 4611 true Chr11: 5987061-5991671 Phaseolus vulgaris
Phvul.011G067100 0.5kb downstream 0.5kb downstream 500 false Chr11: 5991172-5991671 Phaseolus vulgaris
Phvul.011G067100 1.0kb upstream 1.0kb upstream 5111 true Chr11: 5986061-5991171 Phaseolus vulgaris
Phvul.011G067100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5986061-5987060 Phaseolus vulgaris
Phvul.011G067100 1.0kb downstream 1.0kb downstream 5111 true Chr11: 5987061-5992171 Phaseolus vulgaris
Phvul.011G067100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5991172-5992171 Phaseolus vulgaris
Phvul.011G067100 2.0kb upstream 2.0kb upstream 6111 true Chr11: 5985061-5991171 Phaseolus vulgaris
Phvul.011G067100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5985061-5987060 Phaseolus vulgaris
Phvul.011G067100 2.0kb downstream 2.0kb downstream 6111 true Chr11: 5987061-5993171 Phaseolus vulgaris
Phvul.011G067100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5991172-5993171 Phaseolus vulgaris
Phvul.011G067100 5.0kb upstream 5.0kb upstream 9111 true Chr11: 5982061-5991171 Phaseolus vulgaris
Phvul.011G067100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5982061-5987060 Phaseolus vulgaris
Phvul.011G067100 5.0kb downstream 5.0kb downstream 9111 true Chr11: 5987061-5996171 Phaseolus vulgaris
Phvul.011G067100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5991172-5996171 Phaseolus vulgaris
Phvul.011G067100 10.0kb upstream 10.0kb upstream 14111 true Chr11: 5977061-5991171 Phaseolus vulgaris
Phvul.011G067100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5977061-5987060 Phaseolus vulgaris
Phvul.011G067100 10.0kb downstream 10.0kb downstream 14111 true Chr11: 5987061-6001171 Phaseolus vulgaris
Phvul.011G067100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5991172-6001171 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305698 5265 Fabidae View MSA
124067090 5270 Rosid View MSA
123747996 5271 Pentapetalae View MSA
122792245 5272 Eudicot View MSA
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.76954 0.0 22.2048    
cufflinks 4.84026 0.0 26.7902    
cufflinks 18.6541 0.0 71.7697   High
cufflinks 3.50778 0.0 17.1803    
cufflinks 10.4582 0.0 47.0606    
cufflinks 11.1037 0.0 48.2483    
cufflinks 1.86525 0.0 14.4186    
cufflinks 2.86242 0.0 18.8797    
cufflinks 0.537284 0.0 4.16621   Low
cufflinks 1.6915 0.0 10.9768    
cufflinks 9.39021 0.0 43.5462    

0 Strain