Gene : Phvul.011G065100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12428:SF19 - INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC Genomic Order:  671
Name:  ? Phvul.011G065100 Secondary Identifier:  ? PAC:37154792
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G065100 0.5kb upstream 0.5kb upstream 6556 true Chr11: 5835578-5842133 Phaseolus vulgaris
Phvul.011G065100 0.5kb upstream 0.5kb upstream 500 false Chr11: 5835578-5836077 Phaseolus vulgaris
Phvul.011G065100 0.5kb downstream 0.5kb downstream 6556 true Chr11: 5836078-5842633 Phaseolus vulgaris
Phvul.011G065100 0.5kb downstream 0.5kb downstream 500 false Chr11: 5842134-5842633 Phaseolus vulgaris
Phvul.011G065100 1.0kb upstream 1.0kb upstream 7056 true Chr11: 5835078-5842133 Phaseolus vulgaris
Phvul.011G065100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5835078-5836077 Phaseolus vulgaris
Phvul.011G065100 1.0kb downstream 1.0kb downstream 7056 true Chr11: 5836078-5843133 Phaseolus vulgaris
Phvul.011G065100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5842134-5843133 Phaseolus vulgaris
Phvul.011G065100 2.0kb upstream 2.0kb upstream 8056 true Chr11: 5834078-5842133 Phaseolus vulgaris
Phvul.011G065100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5834078-5836077 Phaseolus vulgaris
Phvul.011G065100 2.0kb downstream 2.0kb downstream 8056 true Chr11: 5836078-5844133 Phaseolus vulgaris
Phvul.011G065100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5842134-5844133 Phaseolus vulgaris
Phvul.011G065100 5.0kb upstream 5.0kb upstream 11056 true Chr11: 5831078-5842133 Phaseolus vulgaris
Phvul.011G065100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5831078-5836077 Phaseolus vulgaris
Phvul.011G065100 5.0kb downstream 5.0kb downstream 11056 true Chr11: 5836078-5847133 Phaseolus vulgaris
Phvul.011G065100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5842134-5847133 Phaseolus vulgaris
Phvul.011G065100 10.0kb upstream 10.0kb upstream 16056 true Chr11: 5826078-5842133 Phaseolus vulgaris
Phvul.011G065100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5826078-5836077 Phaseolus vulgaris
Phvul.011G065100 10.0kb downstream 10.0kb downstream 16056 true Chr11: 5836078-5852133 Phaseolus vulgaris
Phvul.011G065100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5842134-5852133 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303777 5265 Fabidae View MSA
124062830 5270 Rosid View MSA
123743978 5271 Pentapetalae View MSA
122791056 5272 Eudicot View MSA
122045068 5273 Angiosperm View MSA
121347702 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.963 0.0 248.21 High  
cufflinks 35.7631 0.0 114.515 High  
cufflinks 269.632 0.0 1204.8 High High
cufflinks 62.1654 0.0 212.027 High  
cufflinks 32.7409 0.0 104.32 High  
cufflinks 74.0198 0.0 260.851 High  
cufflinks 4.85163 0.0 17.2211   Low
cufflinks 7.90654 0.0 29.1156   Low
cufflinks 6.55928 0.0 25.1486   Low
cufflinks 46.0988 0.0 150.585 High  
cufflinks 18.2676 0.0 59.2697    

0 Strain