Gene : Phvul.011G065000 P. vulgaris v2.1
Defline:  (1 of 5) PTHR19375:SF232 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37E-RELATED Genomic Order:  670
Name:  ? Phvul.011G065000 Secondary Identifier:  ? PAC:37154894
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G065000 0.5kb upstream 0.5kb upstream 3589 true Chr11: 5827546-5831134 Phaseolus vulgaris
Phvul.011G065000 0.5kb upstream 0.5kb upstream 500 false Chr11: 5830635-5831134 Phaseolus vulgaris
Phvul.011G065000 0.5kb downstream 0.5kb downstream 3589 true Chr11: 5827046-5830634 Phaseolus vulgaris
Phvul.011G065000 0.5kb downstream 0.5kb downstream 500 false Chr11: 5827046-5827545 Phaseolus vulgaris
Phvul.011G065000 1.0kb upstream 1.0kb upstream 4089 true Chr11: 5827546-5831634 Phaseolus vulgaris
Phvul.011G065000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5830635-5831634 Phaseolus vulgaris
Phvul.011G065000 1.0kb downstream 1.0kb downstream 4089 true Chr11: 5826546-5830634 Phaseolus vulgaris
Phvul.011G065000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5826546-5827545 Phaseolus vulgaris
Phvul.011G065000 2.0kb upstream 2.0kb upstream 5089 true Chr11: 5827546-5832634 Phaseolus vulgaris
Phvul.011G065000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5830635-5832634 Phaseolus vulgaris
Phvul.011G065000 2.0kb downstream 2.0kb downstream 5089 true Chr11: 5825546-5830634 Phaseolus vulgaris
Phvul.011G065000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5825546-5827545 Phaseolus vulgaris
Phvul.011G065000 5.0kb upstream 5.0kb upstream 8089 true Chr11: 5827546-5835634 Phaseolus vulgaris
Phvul.011G065000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5830635-5835634 Phaseolus vulgaris
Phvul.011G065000 5.0kb downstream 5.0kb downstream 8089 true Chr11: 5822546-5830634 Phaseolus vulgaris
Phvul.011G065000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5822546-5827545 Phaseolus vulgaris
Phvul.011G065000 10.0kb upstream 10.0kb upstream 13089 true Chr11: 5827546-5840634 Phaseolus vulgaris
Phvul.011G065000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5830635-5840634 Phaseolus vulgaris
Phvul.011G065000 10.0kb downstream 10.0kb downstream 13089 true Chr11: 5817546-5830634 Phaseolus vulgaris
Phvul.011G065000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5817546-5827545 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311678 5265 Fabidae View MSA
124071606 5270 Rosid View MSA
123753199 5271 Pentapetalae View MSA
122797693 5272 Eudicot View MSA
122051630 5273 Angiosperm View MSA
121350405 5274 Embryophyte View MSA
123428541 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 188.237 0.0 643.568 High  
cufflinks 239.32 0.0 859.641 High High
cufflinks 60.2577 0.0 170.421 High Low
cufflinks 196.184 0.0 664.562 High  
cufflinks 134.443 0.0 425.129 High  
cufflinks 47.0572 0.0 129.722 High Low
cufflinks 130.013 0.0 413.364 High  
cufflinks 139.057 0.0 446.136 High  
cufflinks 80.6742 0.0 237.539 High  
cufflinks 250.841 0.0 908.803 High High
cufflinks 182.384 0.0 613.475 High  

0 Strain