Gene : Phvul.L001671 P. vulgaris v2.1
Defline:  (1 of 10) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  1
Name:  ? Phvul.L001671 Secondary Identifier:  ? PAC:37174282
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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001671 0.5kb upstream 0.5kb upstream 7512 true scaffold_439: 10937-18448 Phaseolus vulgaris
Phvul.L001671 0.5kb upstream 0.5kb upstream 500 false scaffold_439: 17949-18448 Phaseolus vulgaris
Phvul.L001671 0.5kb downstream 0.5kb downstream 7512 true scaffold_439: 10437-17948 Phaseolus vulgaris
Phvul.L001671 0.5kb downstream 0.5kb downstream 500 false scaffold_439: 10437-10936 Phaseolus vulgaris
Phvul.L001671 1.0kb upstream 1.0kb upstream 8012 true scaffold_439: 10937-18948 Phaseolus vulgaris
Phvul.L001671 1.0kb upstream 1.0kb upstream 1000 false scaffold_439: 17949-18948 Phaseolus vulgaris
Phvul.L001671 1.0kb downstream 1.0kb downstream 8012 true scaffold_439: 9937-17948 Phaseolus vulgaris
Phvul.L001671 1.0kb downstream 1.0kb downstream 1000 false scaffold_439: 9937-10936 Phaseolus vulgaris
Phvul.L001671 2.0kb upstream 2.0kb upstream 9012 true scaffold_439: 10937-19948 Phaseolus vulgaris
Phvul.L001671 2.0kb upstream 2.0kb upstream 2000 false scaffold_439: 17949-19948 Phaseolus vulgaris
Phvul.L001671 2.0kb downstream 2.0kb downstream 9012 true scaffold_439: 8937-17948 Phaseolus vulgaris
Phvul.L001671 2.0kb downstream 2.0kb downstream 2000 false scaffold_439: 8937-10936 Phaseolus vulgaris
Phvul.L001671 5.0kb upstream 5.0kb upstream 11213 true scaffold_439: 10937-22149 Phaseolus vulgaris
Phvul.L001671 5.0kb upstream 5.0kb upstream 4201 false scaffold_439: 17949-22149 Phaseolus vulgaris
Phvul.L001671 5.0kb downstream 5.0kb downstream 12012 true scaffold_439: 5937-17948 Phaseolus vulgaris
Phvul.L001671 5.0kb downstream 5.0kb downstream 5000 false scaffold_439: 5937-10936 Phaseolus vulgaris
Phvul.L001671 10.0kb upstream 10.0kb upstream 11213 true scaffold_439: 10937-22149 Phaseolus vulgaris
Phvul.L001671 10.0kb upstream 10.0kb upstream 4201 false scaffold_439: 17949-22149 Phaseolus vulgaris
Phvul.L001671 10.0kb downstream 10.0kb downstream 17012 true scaffold_439: 937-17948 Phaseolus vulgaris
Phvul.L001671 10.0kb downstream 10.0kb downstream 10000 false scaffold_439: 937-10936 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304994 5265 Fabidae View MSA
124070765 5270 Rosid View MSA
123742721 5271 Pentapetalae View MSA
122770367 5272 Eudicot View MSA
122049014 5273 Angiosperm View MSA
121311208 5274 Embryophyte View MSA
123348533 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.405022 0.0 1.43084 Low Low
cufflinks 0.81306 0.0 2.66127    
cufflinks 0.836734 0.0 2.71974    
cufflinks 0.986445 0.0 3.19301    
cufflinks 0.704342 0.0 2.37342    
cufflinks 1.3167 0.0 4.07833    
cufflinks 1.72092 0.0 5.16552   High
cufflinks 1.73602 0.0 5.16444   High
cufflinks 1.26283 0.0 3.93778    
cufflinks 1.75069 0.0 5.25861   High
cufflinks 0.513979 0.0 1.78627 Low Low

0 Strain