Gene : Phvul.L006901 P. vulgaris v2.1
Defline:  (1 of 3) K02913 - large subunit ribosomal protein L33 (RP-L33, MRPL33, rpmG) Genomic Order:  25
Name:  ? Phvul.L006901 Secondary Identifier:  ? PAC:37163937
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L006901 0.5kb upstream 0.5kb upstream 1322 true scaffold_14: 775553-776874 Phaseolus vulgaris
Phvul.L006901 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 775553-776052 Phaseolus vulgaris
Phvul.L006901 0.5kb downstream 0.5kb downstream 1322 true scaffold_14: 776053-777374 Phaseolus vulgaris
Phvul.L006901 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 776875-777374 Phaseolus vulgaris
Phvul.L006901 1.0kb upstream 1.0kb upstream 1822 true scaffold_14: 775053-776874 Phaseolus vulgaris
Phvul.L006901 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 775053-776052 Phaseolus vulgaris
Phvul.L006901 1.0kb downstream 1.0kb downstream 1822 true scaffold_14: 776053-777874 Phaseolus vulgaris
Phvul.L006901 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 776875-777874 Phaseolus vulgaris
Phvul.L006901 2.0kb upstream 2.0kb upstream 2822 true scaffold_14: 774053-776874 Phaseolus vulgaris
Phvul.L006901 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 774053-776052 Phaseolus vulgaris
Phvul.L006901 2.0kb downstream 2.0kb downstream 2822 true scaffold_14: 776053-778874 Phaseolus vulgaris
Phvul.L006901 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 776875-778874 Phaseolus vulgaris
Phvul.L006901 5.0kb upstream 5.0kb upstream 5822 true scaffold_14: 771053-776874 Phaseolus vulgaris
Phvul.L006901 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 771053-776052 Phaseolus vulgaris
Phvul.L006901 5.0kb downstream 5.0kb downstream 5822 true scaffold_14: 776053-781874 Phaseolus vulgaris
Phvul.L006901 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 776875-781874 Phaseolus vulgaris
Phvul.L006901 10.0kb upstream 10.0kb upstream 10822 true scaffold_14: 766053-776874 Phaseolus vulgaris
Phvul.L006901 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 766053-776052 Phaseolus vulgaris
Phvul.L006901 10.0kb downstream 10.0kb downstream 10822 true scaffold_14: 776053-786874 Phaseolus vulgaris
Phvul.L006901 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 776875-786874 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026232 5273 Angiosperm View MSA
122305368 5265 Fabidae View MSA
124037177 5270 Rosid View MSA
123743240 5271 Pentapetalae View MSA
122789761 5272 Eudicot View MSA
121345561 5274 Embryophyte View MSA
123425406 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.13715 0.0 23.0414   High
cufflinks 5.23895 0.0 17.5551    
cufflinks 5.36366 0.0 17.8547    
cufflinks 6.43801 0.0 21.3011    
cufflinks 4.65994 0.0 15.9906    
cufflinks 4.38343 0.0 14.9774    
cufflinks 2.47582 0.0 8.98669   Low
cufflinks 3.97211 0.0 13.626    
cufflinks 3.13081 0.0 11.1438    
cufflinks 1.39578 0.0 5.31632   Low
cufflinks 4.3593 0.0 15.018    

0 Strain