Gene : Phvul.L001643 P. vulgaris v2.1
Defline:  (1 of 3) K02918 - large subunit ribosomal protein L35e (RP-L35e, RPL35) Genomic Order:  1
Name:  ? Phvul.L001643 Secondary Identifier:  ? PAC:37179002
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001643 0.5kb upstream 0.5kb upstream 2886 true scaffold_15: 5972-8857 Phaseolus vulgaris
Phvul.L001643 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 8358-8857 Phaseolus vulgaris
Phvul.L001643 0.5kb downstream 0.5kb downstream 2886 true scaffold_15: 5472-8357 Phaseolus vulgaris
Phvul.L001643 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 5472-5971 Phaseolus vulgaris
Phvul.L001643 1.0kb upstream 1.0kb upstream 3386 true scaffold_15: 5972-9357 Phaseolus vulgaris
Phvul.L001643 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 8358-9357 Phaseolus vulgaris
Phvul.L001643 1.0kb downstream 1.0kb downstream 3386 true scaffold_15: 4972-8357 Phaseolus vulgaris
Phvul.L001643 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 4972-5971 Phaseolus vulgaris
Phvul.L001643 2.0kb upstream 2.0kb upstream 4386 true scaffold_15: 5972-10357 Phaseolus vulgaris
Phvul.L001643 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 8358-10357 Phaseolus vulgaris
Phvul.L001643 2.0kb downstream 2.0kb downstream 4386 true scaffold_15: 3972-8357 Phaseolus vulgaris
Phvul.L001643 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 3972-5971 Phaseolus vulgaris
Phvul.L001643 5.0kb upstream 5.0kb upstream 7386 true scaffold_15: 5972-13357 Phaseolus vulgaris
Phvul.L001643 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 8358-13357 Phaseolus vulgaris
Phvul.L001643 5.0kb downstream 5.0kb downstream 7386 true scaffold_15: 972-8357 Phaseolus vulgaris
Phvul.L001643 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 972-5971 Phaseolus vulgaris
Phvul.L001643 10.0kb upstream 10.0kb upstream 12386 true scaffold_15: 5972-18357 Phaseolus vulgaris
Phvul.L001643 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 8358-18357 Phaseolus vulgaris
Phvul.L001643 10.0kb downstream 10.0kb downstream 8357 true scaffold_15: 1-8357 Phaseolus vulgaris
Phvul.L001643 10.0kb downstream 10.0kb downstream 5971 false scaffold_15: 1-5971 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313417 5265 Fabidae View MSA
124074061 5270 Rosid View MSA
123744654 5271 Pentapetalae View MSA
122786708 5272 Eudicot View MSA
122050445 5273 Angiosperm View MSA
121345704 5274 Embryophyte View MSA
123426654 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.6956 0.0 88.6173 High  
cufflinks 40.9903 0.0 106.777 High  
cufflinks 29.5159 0.0 78.4916    
cufflinks 42.543 0.0 110.611 High  
cufflinks 37.4343 0.0 98.2181 High  
cufflinks 23.4189 0.0 63.2177   Low
cufflinks 30.3618 0.0 80.0515 High  
cufflinks 36.574 0.0 95.5958 High  
cufflinks 45.3025 0.0 117.429 High High
cufflinks 16.4626 0.0 45.8681   Low
cufflinks 32.8775 0.0 86.6019    

0 Strain