Gene : Phvul.011G054400 P. vulgaris v2.1
Defline:  (1 of 1) K16196 - eukaryotic translation initiation factor 2-alpha kinase 4 (EIF2AK4) Genomic Order:  560
Name:  ? Phvul.011G054400 Secondary Identifier:  ? PAC:37154933
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G054400 0.5kb upstream 0.5kb upstream 24459 true Chr11: 4766439-4790897 Phaseolus vulgaris
Phvul.011G054400 0.5kb upstream 0.5kb upstream 500 false Chr11: 4790398-4790897 Phaseolus vulgaris
Phvul.011G054400 0.5kb downstream 0.5kb downstream 24459 true Chr11: 4765939-4790397 Phaseolus vulgaris
Phvul.011G054400 0.5kb downstream 0.5kb downstream 500 false Chr11: 4765939-4766438 Phaseolus vulgaris
Phvul.011G054400 1.0kb upstream 1.0kb upstream 24959 true Chr11: 4766439-4791397 Phaseolus vulgaris
Phvul.011G054400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4790398-4791397 Phaseolus vulgaris
Phvul.011G054400 1.0kb downstream 1.0kb downstream 24959 true Chr11: 4765439-4790397 Phaseolus vulgaris
Phvul.011G054400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4765439-4766438 Phaseolus vulgaris
Phvul.011G054400 2.0kb upstream 2.0kb upstream 25959 true Chr11: 4766439-4792397 Phaseolus vulgaris
Phvul.011G054400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4790398-4792397 Phaseolus vulgaris
Phvul.011G054400 2.0kb downstream 2.0kb downstream 25959 true Chr11: 4764439-4790397 Phaseolus vulgaris
Phvul.011G054400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4764439-4766438 Phaseolus vulgaris
Phvul.011G054400 5.0kb upstream 5.0kb upstream 28959 true Chr11: 4766439-4795397 Phaseolus vulgaris
Phvul.011G054400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4790398-4795397 Phaseolus vulgaris
Phvul.011G054400 5.0kb downstream 5.0kb downstream 28959 true Chr11: 4761439-4790397 Phaseolus vulgaris
Phvul.011G054400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4761439-4766438 Phaseolus vulgaris
Phvul.011G054400 10.0kb upstream 10.0kb upstream 33959 true Chr11: 4766439-4800397 Phaseolus vulgaris
Phvul.011G054400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4790398-4800397 Phaseolus vulgaris
Phvul.011G054400 10.0kb downstream 10.0kb downstream 33959 true Chr11: 4756439-4790397 Phaseolus vulgaris
Phvul.011G054400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4756439-4766438 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300628 5265 Fabidae View MSA
124050438 5270 Rosid View MSA
123738209 5271 Pentapetalae View MSA
122791931 5272 Eudicot View MSA
122046632 5273 Angiosperm View MSA
121347424 5274 Embryophyte View MSA
123427860 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.67691 0.0 3.23861   Low
cufflinks 1.13145 0.0 4.61269    
cufflinks 1.63795 0.0 5.84362    
cufflinks 0.583901 0.0 2.20282   Low
cufflinks 2.23269 0.0 7.58687    
cufflinks 1.74638 0.0 6.16646    
cufflinks 2.96682 0.0 9.45114   High
cufflinks 2.76395 0.0 8.98926    
cufflinks 2.40963 0.0 9.56528    
cufflinks 2.60379 0.0 10.013    
cufflinks 1.29964 0.0 4.12555    

0 Strain