Gene : Phvul.011G055400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24349:SF160 - CALCIUM-DEPENDENT PROTEIN KINASE 24 Genomic Order:  570
Name:  ? Phvul.011G055400 Secondary Identifier:  ? PAC:37155998
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G055400 0.5kb upstream 0.5kb upstream 4569 true Chr11: 4877234-4881802 Phaseolus vulgaris
Phvul.011G055400 0.5kb upstream 0.5kb upstream 500 false Chr11: 4877234-4877733 Phaseolus vulgaris
Phvul.011G055400 0.5kb downstream 0.5kb downstream 4569 true Chr11: 4877734-4882302 Phaseolus vulgaris
Phvul.011G055400 0.5kb downstream 0.5kb downstream 500 false Chr11: 4881803-4882302 Phaseolus vulgaris
Phvul.011G055400 1.0kb upstream 1.0kb upstream 5069 true Chr11: 4876734-4881802 Phaseolus vulgaris
Phvul.011G055400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4876734-4877733 Phaseolus vulgaris
Phvul.011G055400 1.0kb downstream 1.0kb downstream 5069 true Chr11: 4877734-4882802 Phaseolus vulgaris
Phvul.011G055400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4881803-4882802 Phaseolus vulgaris
Phvul.011G055400 2.0kb upstream 2.0kb upstream 6069 true Chr11: 4875734-4881802 Phaseolus vulgaris
Phvul.011G055400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4875734-4877733 Phaseolus vulgaris
Phvul.011G055400 2.0kb downstream 2.0kb downstream 6069 true Chr11: 4877734-4883802 Phaseolus vulgaris
Phvul.011G055400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4881803-4883802 Phaseolus vulgaris
Phvul.011G055400 5.0kb upstream 5.0kb upstream 9069 true Chr11: 4872734-4881802 Phaseolus vulgaris
Phvul.011G055400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4872734-4877733 Phaseolus vulgaris
Phvul.011G055400 5.0kb downstream 5.0kb downstream 9069 true Chr11: 4877734-4886802 Phaseolus vulgaris
Phvul.011G055400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4881803-4886802 Phaseolus vulgaris
Phvul.011G055400 10.0kb upstream 10.0kb upstream 14069 true Chr11: 4867734-4881802 Phaseolus vulgaris
Phvul.011G055400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4867734-4877733 Phaseolus vulgaris
Phvul.011G055400 10.0kb downstream 10.0kb downstream 14069 true Chr11: 4877734-4891802 Phaseolus vulgaris
Phvul.011G055400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4881803-4891802 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779275 5273 Angiosperm View MSA
122301214 5265 Fabidae View MSA
124066973 5270 Rosid View MSA
123741772 5271 Pentapetalae View MSA
122770123 5272 Eudicot View MSA
121050948 5274 Embryophyte View MSA
123091056 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.35834 0.0 14.7378    
cufflinks 0.0360308 0.0 0.160355 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.9914 0.0 13.8799    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain