Gene : Phvul.011G056516 P. vulgaris v2.1
Defline:  (1 of 2) K05574 - NAD(P)H-quinone oxidoreductase subunit 3 (ndhC) Genomic Order:  582
Name:  ? Phvul.011G056516 Secondary Identifier:  ? PAC:37155637
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G056516 0.5kb upstream 0.5kb upstream 925 true Chr11: 4996846-4997770 Phaseolus vulgaris
Phvul.011G056516 0.5kb upstream 0.5kb upstream 500 false Chr11: 4996846-4997345 Phaseolus vulgaris
Phvul.011G056516 0.5kb downstream 0.5kb downstream 925 true Chr11: 4997346-4998270 Phaseolus vulgaris
Phvul.011G056516 0.5kb downstream 0.5kb downstream 500 false Chr11: 4997771-4998270 Phaseolus vulgaris
Phvul.011G056516 1.0kb upstream 1.0kb upstream 1425 true Chr11: 4996346-4997770 Phaseolus vulgaris
Phvul.011G056516 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4996346-4997345 Phaseolus vulgaris
Phvul.011G056516 1.0kb downstream 1.0kb downstream 1425 true Chr11: 4997346-4998770 Phaseolus vulgaris
Phvul.011G056516 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4997771-4998770 Phaseolus vulgaris
Phvul.011G056516 2.0kb upstream 2.0kb upstream 2425 true Chr11: 4995346-4997770 Phaseolus vulgaris
Phvul.011G056516 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4995346-4997345 Phaseolus vulgaris
Phvul.011G056516 2.0kb downstream 2.0kb downstream 2425 true Chr11: 4997346-4999770 Phaseolus vulgaris
Phvul.011G056516 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4997771-4999770 Phaseolus vulgaris
Phvul.011G056516 5.0kb upstream 5.0kb upstream 5425 true Chr11: 4992346-4997770 Phaseolus vulgaris
Phvul.011G056516 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4992346-4997345 Phaseolus vulgaris
Phvul.011G056516 5.0kb downstream 5.0kb downstream 5425 true Chr11: 4997346-5002770 Phaseolus vulgaris
Phvul.011G056516 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4997771-5002770 Phaseolus vulgaris
Phvul.011G056516 10.0kb upstream 10.0kb upstream 10425 true Chr11: 4987346-4997770 Phaseolus vulgaris
Phvul.011G056516 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4987346-4997345 Phaseolus vulgaris
Phvul.011G056516 10.0kb downstream 10.0kb downstream 10425 true Chr11: 4997346-5007770 Phaseolus vulgaris
Phvul.011G056516 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4997771-5007770 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029225 5273 Angiosperm View MSA
122296460 5265 Fabidae View MSA
124071539 5270 Rosid View MSA
123743152 5271 Pentapetalae View MSA
122792621 5272 Eudicot View MSA
121348446 5274 Embryophyte View MSA
123425081 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.771189 0.0 3.31612    
cufflinks 0.614619 0.0 2.73536    
cufflinks 23.5634 0.0 74.4533   High
cufflinks 7.31529 0.0 26.42    
cufflinks 4.27311 0.0 16.2384    
cufflinks 20.8894 0.0 67.0653   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.165643 0.0 0.838691 Low Low
cufflinks 0.560695 0.0 2.53349    
cufflinks 2.52224 0.0 9.93987    
cufflinks 1.16641 0.0 4.91867    

0 Strain