Gene : Phvul.011G056600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10024:SF243 - ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  587
Name:  ? Phvul.011G056600 Secondary Identifier:  ? PAC:37156476
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G056600 0.5kb upstream 0.5kb upstream 3112 true Chr11: 5013582-5016693 Phaseolus vulgaris
Phvul.011G056600 0.5kb upstream 0.5kb upstream 500 false Chr11: 5013582-5014081 Phaseolus vulgaris
Phvul.011G056600 0.5kb downstream 0.5kb downstream 3112 true Chr11: 5014082-5017193 Phaseolus vulgaris
Phvul.011G056600 0.5kb downstream 0.5kb downstream 500 false Chr11: 5016694-5017193 Phaseolus vulgaris
Phvul.011G056600 1.0kb upstream 1.0kb upstream 3612 true Chr11: 5013082-5016693 Phaseolus vulgaris
Phvul.011G056600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5013082-5014081 Phaseolus vulgaris
Phvul.011G056600 1.0kb downstream 1.0kb downstream 3612 true Chr11: 5014082-5017693 Phaseolus vulgaris
Phvul.011G056600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5016694-5017693 Phaseolus vulgaris
Phvul.011G056600 2.0kb upstream 2.0kb upstream 4612 true Chr11: 5012082-5016693 Phaseolus vulgaris
Phvul.011G056600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5012082-5014081 Phaseolus vulgaris
Phvul.011G056600 2.0kb downstream 2.0kb downstream 4612 true Chr11: 5014082-5018693 Phaseolus vulgaris
Phvul.011G056600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5016694-5018693 Phaseolus vulgaris
Phvul.011G056600 5.0kb upstream 5.0kb upstream 7612 true Chr11: 5009082-5016693 Phaseolus vulgaris
Phvul.011G056600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5009082-5014081 Phaseolus vulgaris
Phvul.011G056600 5.0kb downstream 5.0kb downstream 7612 true Chr11: 5014082-5021693 Phaseolus vulgaris
Phvul.011G056600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5016694-5021693 Phaseolus vulgaris
Phvul.011G056600 10.0kb upstream 10.0kb upstream 12612 true Chr11: 5004082-5016693 Phaseolus vulgaris
Phvul.011G056600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5004082-5014081 Phaseolus vulgaris
Phvul.011G056600 10.0kb downstream 10.0kb downstream 12612 true Chr11: 5014082-5026693 Phaseolus vulgaris
Phvul.011G056600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5016694-5026693 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309490 5265 Fabidae View MSA
124067885 5270 Rosid View MSA
123751578 5271 Pentapetalae View MSA
122793897 5272 Eudicot View MSA
122046174 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.10297 0.0 3.54805    
cufflinks 7.87964 0.0 20.8035    
cufflinks 3.31259 0.0 9.36313    
cufflinks 2.48781 0.0 7.33851    
cufflinks 3.5695 0.0 10.0854    
cufflinks 6.96552 0.0 18.5263    
cufflinks 1.64084 0.0 5.02595    
cufflinks 1.26274 0.0 3.98154    
cufflinks 3.17217 0.0 9.04447    
cufflinks 0.0649445 0.0 0.270551 Low Low
cufflinks 6.01883 0.0 16.2367    

0 Strain