Gene : Phvul.011G056580 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11831:SF4 - 37S RIBOSOMAL PROTEIN NAM9, MITOCHONDRIAL Genomic Order:  586
Name:  ? Phvul.011G056580 Secondary Identifier:  ? PAC:37156317
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G056580 0.5kb upstream 0.5kb upstream 803 true Chr11: 5001527-5002329 Phaseolus vulgaris
Phvul.011G056580 0.5kb upstream 0.5kb upstream 500 false Chr11: 5001527-5002026 Phaseolus vulgaris
Phvul.011G056580 0.5kb downstream 0.5kb downstream 803 true Chr11: 5002027-5002829 Phaseolus vulgaris
Phvul.011G056580 0.5kb downstream 0.5kb downstream 500 false Chr11: 5002330-5002829 Phaseolus vulgaris
Phvul.011G056580 1.0kb upstream 1.0kb upstream 1303 true Chr11: 5001027-5002329 Phaseolus vulgaris
Phvul.011G056580 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5001027-5002026 Phaseolus vulgaris
Phvul.011G056580 1.0kb downstream 1.0kb downstream 1303 true Chr11: 5002027-5003329 Phaseolus vulgaris
Phvul.011G056580 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5002330-5003329 Phaseolus vulgaris
Phvul.011G056580 2.0kb upstream 2.0kb upstream 2303 true Chr11: 5000027-5002329 Phaseolus vulgaris
Phvul.011G056580 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5000027-5002026 Phaseolus vulgaris
Phvul.011G056580 2.0kb downstream 2.0kb downstream 2303 true Chr11: 5002027-5004329 Phaseolus vulgaris
Phvul.011G056580 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5002330-5004329 Phaseolus vulgaris
Phvul.011G056580 5.0kb upstream 5.0kb upstream 5303 true Chr11: 4997027-5002329 Phaseolus vulgaris
Phvul.011G056580 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4997027-5002026 Phaseolus vulgaris
Phvul.011G056580 5.0kb downstream 5.0kb downstream 5303 true Chr11: 5002027-5007329 Phaseolus vulgaris
Phvul.011G056580 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5002330-5007329 Phaseolus vulgaris
Phvul.011G056580 10.0kb upstream 10.0kb upstream 10303 true Chr11: 4992027-5002329 Phaseolus vulgaris
Phvul.011G056580 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4992027-5002026 Phaseolus vulgaris
Phvul.011G056580 10.0kb downstream 10.0kb downstream 10303 true Chr11: 5002027-5012329 Phaseolus vulgaris
Phvul.011G056580 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5002330-5012329 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028910 5273 Angiosperm View MSA
122253177 5265 Fabidae Singleton cluster - no MSA
124073492 5270 Rosid View MSA
123750002 5271 Pentapetalae View MSA
122790562 5272 Eudicot View MSA
121298338 5274 Embryophyte View MSA
123336315 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.81659 0.0 3.75868    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.34167 0.0 35.1047   High
cufflinks 6.77299 0.0 25.9375    
cufflinks 2.63529 0.0 11.1142    
cufflinks 16.2366 0.0 58.1573   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.33435 0.0 1.6929 Low Low
cufflinks 0.521873 0.0 2.53482    
cufflinks 5.03834 0.0 20.003    
cufflinks 0.473285 0.0 2.34799 Low Low

0 Strain