Gene : Phvul.011G059000 P. vulgaris v2.1
Genomic Order:  610 Name:  ? Phvul.011G059000
Secondary Identifier:  ? PAC:37154678
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G059000 0.5kb upstream 0.5kb upstream 1897 true Chr11: 5276664-5278560 Phaseolus vulgaris
Phvul.011G059000 0.5kb upstream 0.5kb upstream 500 false Chr11: 5276664-5277163 Phaseolus vulgaris
Phvul.011G059000 0.5kb downstream 0.5kb downstream 1897 true Chr11: 5277164-5279060 Phaseolus vulgaris
Phvul.011G059000 0.5kb downstream 0.5kb downstream 500 false Chr11: 5278561-5279060 Phaseolus vulgaris
Phvul.011G059000 1.0kb upstream 1.0kb upstream 2397 true Chr11: 5276164-5278560 Phaseolus vulgaris
Phvul.011G059000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5276164-5277163 Phaseolus vulgaris
Phvul.011G059000 1.0kb downstream 1.0kb downstream 2397 true Chr11: 5277164-5279560 Phaseolus vulgaris
Phvul.011G059000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5278561-5279560 Phaseolus vulgaris
Phvul.011G059000 2.0kb upstream 2.0kb upstream 3397 true Chr11: 5275164-5278560 Phaseolus vulgaris
Phvul.011G059000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5275164-5277163 Phaseolus vulgaris
Phvul.011G059000 2.0kb downstream 2.0kb downstream 3397 true Chr11: 5277164-5280560 Phaseolus vulgaris
Phvul.011G059000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5278561-5280560 Phaseolus vulgaris
Phvul.011G059000 5.0kb upstream 5.0kb upstream 6397 true Chr11: 5272164-5278560 Phaseolus vulgaris
Phvul.011G059000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5272164-5277163 Phaseolus vulgaris
Phvul.011G059000 5.0kb downstream 5.0kb downstream 6397 true Chr11: 5277164-5283560 Phaseolus vulgaris
Phvul.011G059000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5278561-5283560 Phaseolus vulgaris
Phvul.011G059000 10.0kb upstream 10.0kb upstream 11397 true Chr11: 5267164-5278560 Phaseolus vulgaris
Phvul.011G059000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5267164-5277163 Phaseolus vulgaris
Phvul.011G059000 10.0kb downstream 10.0kb downstream 11397 true Chr11: 5277164-5288560 Phaseolus vulgaris
Phvul.011G059000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5278561-5288560 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314126 5265 Fabidae View MSA
124072659 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.241252 0.0 1.01653 Low  
cufflinks 0.0765039 0.0 0.354657 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0752336 0.0 0.353263 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 11.4902 0.0 32.3571   High
cufflinks 17.1329 0.0 46.6709   High
cufflinks 7.96711 0.0 23.3459    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0894476 0.0 0.412102 Low  

0 Strain