Gene : Phvul.011G047200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR30546//PTHR30546:SF8 - FLAVODOXIN-RELATED PROTEIN WRBA-RELATED // SUBFAMILY NOT NAMED Genomic Order:  489
Name:  ? Phvul.011G047200 Secondary Identifier:  ? PAC:37156338
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7279 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G047200 0.5kb upstream 0.5kb upstream 2336 true Chr11: 4253254-4255589 Phaseolus vulgaris
Phvul.011G047200 0.5kb upstream 0.5kb upstream 500 false Chr11: 4253254-4253753 Phaseolus vulgaris
Phvul.011G047200 0.5kb downstream 0.5kb downstream 2336 true Chr11: 4253754-4256089 Phaseolus vulgaris
Phvul.011G047200 0.5kb downstream 0.5kb downstream 500 false Chr11: 4255590-4256089 Phaseolus vulgaris
Phvul.011G047200 1.0kb upstream 1.0kb upstream 2836 true Chr11: 4252754-4255589 Phaseolus vulgaris
Phvul.011G047200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4252754-4253753 Phaseolus vulgaris
Phvul.011G047200 1.0kb downstream 1.0kb downstream 2836 true Chr11: 4253754-4256589 Phaseolus vulgaris
Phvul.011G047200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4255590-4256589 Phaseolus vulgaris
Phvul.011G047200 2.0kb upstream 2.0kb upstream 3836 true Chr11: 4251754-4255589 Phaseolus vulgaris
Phvul.011G047200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4251754-4253753 Phaseolus vulgaris
Phvul.011G047200 2.0kb downstream 2.0kb downstream 3836 true Chr11: 4253754-4257589 Phaseolus vulgaris
Phvul.011G047200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4255590-4257589 Phaseolus vulgaris
Phvul.011G047200 5.0kb upstream 5.0kb upstream 6836 true Chr11: 4248754-4255589 Phaseolus vulgaris
Phvul.011G047200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4248754-4253753 Phaseolus vulgaris
Phvul.011G047200 5.0kb downstream 5.0kb downstream 6836 true Chr11: 4253754-4260589 Phaseolus vulgaris
Phvul.011G047200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4255590-4260589 Phaseolus vulgaris
Phvul.011G047200 10.0kb upstream 10.0kb upstream 11836 true Chr11: 4243754-4255589 Phaseolus vulgaris
Phvul.011G047200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4243754-4253753 Phaseolus vulgaris
Phvul.011G047200 10.0kb downstream 10.0kb downstream 11836 true Chr11: 4253754-4265589 Phaseolus vulgaris
Phvul.011G047200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4255590-4265589 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313825 5265 Fabidae View MSA
124071872 5270 Rosid View MSA
123747296 5271 Pentapetalae View MSA
122787276 5272 Eudicot View MSA
122042695 5273 Angiosperm View MSA
121346048 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.25607 0.0 23.4582    
cufflinks 1.80246 0.0 6.05931   Low
cufflinks 2.77903 0.0 8.89224    
cufflinks 6.38785 0.0 18.7682    
cufflinks 9.7897 0.0 27.4645    
cufflinks 1.73605 0.0 5.86015   Low
cufflinks 23.3764 0.0 61.0012   High
cufflinks 8.54045 0.0 24.0588    
cufflinks 54.5027 0.0 141.793 High High
cufflinks 4.50177 0.0 13.6783    
cufflinks 12.8238 0.0 35.004    

0 Strain