Gene : Phvul.011G048900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13871:SF51 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN Genomic Order:  506
Name:  ? Phvul.011G048900 Secondary Identifier:  ? PAC:37154729
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G048900 0.5kb upstream 0.5kb upstream 1724 true Chr11: 4373731-4375454 Phaseolus vulgaris
Phvul.011G048900 0.5kb upstream 0.5kb upstream 500 false Chr11: 4374955-4375454 Phaseolus vulgaris
Phvul.011G048900 0.5kb downstream 0.5kb downstream 1724 true Chr11: 4373231-4374954 Phaseolus vulgaris
Phvul.011G048900 0.5kb downstream 0.5kb downstream 500 false Chr11: 4373231-4373730 Phaseolus vulgaris
Phvul.011G048900 1.0kb upstream 1.0kb upstream 2224 true Chr11: 4373731-4375954 Phaseolus vulgaris
Phvul.011G048900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4374955-4375954 Phaseolus vulgaris
Phvul.011G048900 1.0kb downstream 1.0kb downstream 2224 true Chr11: 4372731-4374954 Phaseolus vulgaris
Phvul.011G048900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4372731-4373730 Phaseolus vulgaris
Phvul.011G048900 2.0kb upstream 2.0kb upstream 3224 true Chr11: 4373731-4376954 Phaseolus vulgaris
Phvul.011G048900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4374955-4376954 Phaseolus vulgaris
Phvul.011G048900 2.0kb downstream 2.0kb downstream 3224 true Chr11: 4371731-4374954 Phaseolus vulgaris
Phvul.011G048900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4371731-4373730 Phaseolus vulgaris
Phvul.011G048900 5.0kb upstream 5.0kb upstream 6224 true Chr11: 4373731-4379954 Phaseolus vulgaris
Phvul.011G048900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4374955-4379954 Phaseolus vulgaris
Phvul.011G048900 5.0kb downstream 5.0kb downstream 6224 true Chr11: 4368731-4374954 Phaseolus vulgaris
Phvul.011G048900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4368731-4373730 Phaseolus vulgaris
Phvul.011G048900 10.0kb upstream 10.0kb upstream 11224 true Chr11: 4373731-4384954 Phaseolus vulgaris
Phvul.011G048900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4374955-4384954 Phaseolus vulgaris
Phvul.011G048900 10.0kb downstream 10.0kb downstream 11224 true Chr11: 4363731-4374954 Phaseolus vulgaris
Phvul.011G048900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4363731-4373730 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300166 5265 Fabidae View MSA
124074302 5270 Rosid View MSA
123750493 5271 Pentapetalae View MSA
122796546 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4727 0.0 61.3942   High
cufflinks 3.38804 0.0 10.5825    
cufflinks 6.06148 0.0 17.6887    
cufflinks 1.46497 0.0 5.04116    
cufflinks 3.41722 0.0 10.6703    
cufflinks 2.47372 0.0 8.00314    
cufflinks 1.23239 0.0 4.29942    
cufflinks 0.202353 0.0 0.824664 Low Low
cufflinks 1.42147 0.0 4.88161    
cufflinks 0.129822 0.0 0.550376 Low Low
cufflinks 5.47616 0.0 16.1787    

0 Strain