Gene : Phvul.011G051800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22957:SF26 - PROTEIN TBC-3, ISOFORM B Genomic Order:  535
Name:  ? Phvul.011G051800 Secondary Identifier:  ? PAC:37155865
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G051800 0.5kb upstream 0.5kb upstream 8655 true Chr11: 4564080-4572734 Phaseolus vulgaris
Phvul.011G051800 0.5kb upstream 0.5kb upstream 500 false Chr11: 4572235-4572734 Phaseolus vulgaris
Phvul.011G051800 0.5kb downstream 0.5kb downstream 8655 true Chr11: 4563580-4572234 Phaseolus vulgaris
Phvul.011G051800 0.5kb downstream 0.5kb downstream 500 false Chr11: 4563580-4564079 Phaseolus vulgaris
Phvul.011G051800 1.0kb upstream 1.0kb upstream 9155 true Chr11: 4564080-4573234 Phaseolus vulgaris
Phvul.011G051800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4572235-4573234 Phaseolus vulgaris
Phvul.011G051800 1.0kb downstream 1.0kb downstream 9155 true Chr11: 4563080-4572234 Phaseolus vulgaris
Phvul.011G051800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4563080-4564079 Phaseolus vulgaris
Phvul.011G051800 2.0kb upstream 2.0kb upstream 10155 true Chr11: 4564080-4574234 Phaseolus vulgaris
Phvul.011G051800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4572235-4574234 Phaseolus vulgaris
Phvul.011G051800 2.0kb downstream 2.0kb downstream 10155 true Chr11: 4562080-4572234 Phaseolus vulgaris
Phvul.011G051800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4562080-4564079 Phaseolus vulgaris
Phvul.011G051800 5.0kb upstream 5.0kb upstream 13155 true Chr11: 4564080-4577234 Phaseolus vulgaris
Phvul.011G051800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4572235-4577234 Phaseolus vulgaris
Phvul.011G051800 5.0kb downstream 5.0kb downstream 13155 true Chr11: 4559080-4572234 Phaseolus vulgaris
Phvul.011G051800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4559080-4564079 Phaseolus vulgaris
Phvul.011G051800 10.0kb upstream 10.0kb upstream 18155 true Chr11: 4564080-4582234 Phaseolus vulgaris
Phvul.011G051800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4572235-4582234 Phaseolus vulgaris
Phvul.011G051800 10.0kb downstream 10.0kb downstream 18155 true Chr11: 4554080-4572234 Phaseolus vulgaris
Phvul.011G051800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4554080-4564079 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312495 5265 Fabidae View MSA
124067650 5270 Rosid View MSA
123749842 5271 Pentapetalae View MSA
122786792 5272 Eudicot View MSA
122047637 5273 Angiosperm View MSA
121347047 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5123 0.0 27.9273    
cufflinks 9.25847 0.0 24.8258    
cufflinks 6.79399 0.0 18.6709   Low
cufflinks 7.75479 0.0 21.1315    
cufflinks 8.20588 0.0 22.3723    
cufflinks 6.52539 0.0 17.9958   Low
cufflinks 11.3691 0.0 30.0077    
cufflinks 16.6864 0.0 43.2601   High
cufflinks 10.4224 0.0 27.6997    
cufflinks 12.278 0.0 32.335    
cufflinks 10.0447 0.0 26.865    

0 Strain