Gene : Phvul.011G050600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31920:SF18 - B3 DOMAIN-CONTAINING PROTEIN REM19-RELATED Genomic Order:  523
Name:  ? Phvul.011G050600 Secondary Identifier:  ? PAC:37157191
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G050600 0.5kb upstream 0.5kb upstream 3881 true Chr11: 4497826-4501706 Phaseolus vulgaris
Phvul.011G050600 0.5kb upstream 0.5kb upstream 500 false Chr11: 4501207-4501706 Phaseolus vulgaris
Phvul.011G050600 0.5kb downstream 0.5kb downstream 3881 true Chr11: 4497326-4501206 Phaseolus vulgaris
Phvul.011G050600 0.5kb downstream 0.5kb downstream 500 false Chr11: 4497326-4497825 Phaseolus vulgaris
Phvul.011G050600 1.0kb upstream 1.0kb upstream 4381 true Chr11: 4497826-4502206 Phaseolus vulgaris
Phvul.011G050600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4501207-4502206 Phaseolus vulgaris
Phvul.011G050600 1.0kb downstream 1.0kb downstream 4381 true Chr11: 4496826-4501206 Phaseolus vulgaris
Phvul.011G050600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4496826-4497825 Phaseolus vulgaris
Phvul.011G050600 2.0kb upstream 2.0kb upstream 5381 true Chr11: 4497826-4503206 Phaseolus vulgaris
Phvul.011G050600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4501207-4503206 Phaseolus vulgaris
Phvul.011G050600 2.0kb downstream 2.0kb downstream 5381 true Chr11: 4495826-4501206 Phaseolus vulgaris
Phvul.011G050600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4495826-4497825 Phaseolus vulgaris
Phvul.011G050600 5.0kb upstream 5.0kb upstream 8381 true Chr11: 4497826-4506206 Phaseolus vulgaris
Phvul.011G050600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4501207-4506206 Phaseolus vulgaris
Phvul.011G050600 5.0kb downstream 5.0kb downstream 8381 true Chr11: 4492826-4501206 Phaseolus vulgaris
Phvul.011G050600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4492826-4497825 Phaseolus vulgaris
Phvul.011G050600 10.0kb upstream 10.0kb upstream 13381 true Chr11: 4497826-4511206 Phaseolus vulgaris
Phvul.011G050600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4501207-4511206 Phaseolus vulgaris
Phvul.011G050600 10.0kb downstream 10.0kb downstream 13381 true Chr11: 4487826-4501206 Phaseolus vulgaris
Phvul.011G050600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4487826-4497825 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309296 5265 Fabidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.349 0.0 66.3456   High
cufflinks 10.8136 0.0 40.5726    
cufflinks 0.465646 0.0 3.72309 Low Low
cufflinks 8.01202 0.0 31.5089    
cufflinks 0.869733 0.0 6.85735    
cufflinks 1.1395 0.0 7.31553    
cufflinks 6.89382 0.0 26.8719    
cufflinks 4.27851 0.0 19.2494    
cufflinks 6.02611 0.0 25.0162    
cufflinks 6.93681 0.0 27.6743    
cufflinks 0.419302 0.0 2.77859 Low Low

0 Strain