Gene : Phvul.011G050800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31920:SF20 - B3 DOMAIN-CONTAINING PROTEIN REM23 Genomic Order:  525
Name:  ? Phvul.011G050800 Secondary Identifier:  ? PAC:37155295
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G050800 0.5kb upstream 0.5kb upstream 2478 true Chr11: 4514690-4517167 Phaseolus vulgaris
Phvul.011G050800 0.5kb upstream 0.5kb upstream 500 false Chr11: 4516668-4517167 Phaseolus vulgaris
Phvul.011G050800 0.5kb downstream 0.5kb downstream 2478 true Chr11: 4514190-4516667 Phaseolus vulgaris
Phvul.011G050800 0.5kb downstream 0.5kb downstream 500 false Chr11: 4514190-4514689 Phaseolus vulgaris
Phvul.011G050800 1.0kb upstream 1.0kb upstream 2978 true Chr11: 4514690-4517667 Phaseolus vulgaris
Phvul.011G050800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4516668-4517667 Phaseolus vulgaris
Phvul.011G050800 1.0kb downstream 1.0kb downstream 2978 true Chr11: 4513690-4516667 Phaseolus vulgaris
Phvul.011G050800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4513690-4514689 Phaseolus vulgaris
Phvul.011G050800 2.0kb upstream 2.0kb upstream 3978 true Chr11: 4514690-4518667 Phaseolus vulgaris
Phvul.011G050800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4516668-4518667 Phaseolus vulgaris
Phvul.011G050800 2.0kb downstream 2.0kb downstream 3978 true Chr11: 4512690-4516667 Phaseolus vulgaris
Phvul.011G050800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4512690-4514689 Phaseolus vulgaris
Phvul.011G050800 5.0kb upstream 5.0kb upstream 6978 true Chr11: 4514690-4521667 Phaseolus vulgaris
Phvul.011G050800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4516668-4521667 Phaseolus vulgaris
Phvul.011G050800 5.0kb downstream 5.0kb downstream 6978 true Chr11: 4509690-4516667 Phaseolus vulgaris
Phvul.011G050800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4509690-4514689 Phaseolus vulgaris
Phvul.011G050800 10.0kb upstream 10.0kb upstream 11978 true Chr11: 4514690-4526667 Phaseolus vulgaris
Phvul.011G050800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4516668-4526667 Phaseolus vulgaris
Phvul.011G050800 10.0kb downstream 10.0kb downstream 11978 true Chr11: 4504690-4516667 Phaseolus vulgaris
Phvul.011G050800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4504690-4514689 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253548 5265 Fabidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.944599 0.0 3.50795    
cufflinks 2.57833 0.0 8.66753   High
cufflinks 0.0654461 0.0 0.30568 Low  
cufflinks 3.009 0.0 10.0131   High
cufflinks 0.429992 0.0 1.71338 Low  
cufflinks 0.252764 0.0 1.0425 Low  
cufflinks 0.0886961 0.0 0.403832 Low  
cufflinks 0.342335 0.0 1.3731 Low  
cufflinks 0.0960725 0.0 0.434102 Low  
cufflinks 0.0208355 0.0 0.111447 Low Low
cufflinks 0.37621 0.0 1.51132 Low  

0 Strain