Gene : Phvul.011G051000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR30560//PTHR30560:SF2 - TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE // SUBFAMILY NOT NAMED Genomic Order:  527
Name:  ? Phvul.011G051000 Secondary Identifier:  ? PAC:37157354
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G051000 0.5kb upstream 0.5kb upstream 3688 true Chr11: 4520046-4523733 Phaseolus vulgaris
Phvul.011G051000 0.5kb upstream 0.5kb upstream 500 false Chr11: 4523234-4523733 Phaseolus vulgaris
Phvul.011G051000 0.5kb downstream 0.5kb downstream 3688 true Chr11: 4519546-4523233 Phaseolus vulgaris
Phvul.011G051000 0.5kb downstream 0.5kb downstream 500 false Chr11: 4519546-4520045 Phaseolus vulgaris
Phvul.011G051000 1.0kb upstream 1.0kb upstream 4188 true Chr11: 4520046-4524233 Phaseolus vulgaris
Phvul.011G051000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4523234-4524233 Phaseolus vulgaris
Phvul.011G051000 1.0kb downstream 1.0kb downstream 4188 true Chr11: 4519046-4523233 Phaseolus vulgaris
Phvul.011G051000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4519046-4520045 Phaseolus vulgaris
Phvul.011G051000 2.0kb upstream 2.0kb upstream 5188 true Chr11: 4520046-4525233 Phaseolus vulgaris
Phvul.011G051000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4523234-4525233 Phaseolus vulgaris
Phvul.011G051000 2.0kb downstream 2.0kb downstream 5188 true Chr11: 4518046-4523233 Phaseolus vulgaris
Phvul.011G051000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4518046-4520045 Phaseolus vulgaris
Phvul.011G051000 5.0kb upstream 5.0kb upstream 8188 true Chr11: 4520046-4528233 Phaseolus vulgaris
Phvul.011G051000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4523234-4528233 Phaseolus vulgaris
Phvul.011G051000 5.0kb downstream 5.0kb downstream 8188 true Chr11: 4515046-4523233 Phaseolus vulgaris
Phvul.011G051000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4515046-4520045 Phaseolus vulgaris
Phvul.011G051000 10.0kb upstream 10.0kb upstream 13188 true Chr11: 4520046-4533233 Phaseolus vulgaris
Phvul.011G051000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4523234-4533233 Phaseolus vulgaris
Phvul.011G051000 10.0kb downstream 10.0kb downstream 13188 true Chr11: 4510046-4523233 Phaseolus vulgaris
Phvul.011G051000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4510046-4520045 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311495 5265 Fabidae View MSA
124037503 5270 Rosid View MSA
123748719 5271 Pentapetalae View MSA
122795151 5272 Eudicot View MSA
122048682 5273 Angiosperm View MSA
121348209 5274 Embryophyte View MSA
123380773 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.36061 0.0 10.8232    
cufflinks 5.46451 0.0 16.7346    
cufflinks 25.7367 0.0 67.8994   High
cufflinks 2.91781 0.0 9.65402    
cufflinks 2.43249 0.0 8.2406    
cufflinks 12.4812 0.0 34.9462   High
cufflinks 0.239312 0.0 0.983889 Low Low
cufflinks 0.282078 0.0 1.13995 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.26281 0.0 7.67085    
cufflinks 1.91819 0.0 6.65049    

0 Strain