Gene : Phvul.011G040600 P. vulgaris v2.1
Defline:  (1 of 2) 2.7.1.30 - Glycerol kinase / Glycerokinase Genomic Order:  422
Name:  ? Phvul.011G040600 Secondary Identifier:  ? PAC:37157364
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-4261 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G040600 0.5kb upstream 0.5kb upstream 4479 true Chr11: 3678415-3682893 Phaseolus vulgaris
Phvul.011G040600 0.5kb upstream 0.5kb upstream 500 false Chr11: 3682394-3682893 Phaseolus vulgaris
Phvul.011G040600 0.5kb downstream 0.5kb downstream 4479 true Chr11: 3677915-3682393 Phaseolus vulgaris
Phvul.011G040600 0.5kb downstream 0.5kb downstream 500 false Chr11: 3677915-3678414 Phaseolus vulgaris
Phvul.011G040600 1.0kb upstream 1.0kb upstream 4979 true Chr11: 3678415-3683393 Phaseolus vulgaris
Phvul.011G040600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3682394-3683393 Phaseolus vulgaris
Phvul.011G040600 1.0kb downstream 1.0kb downstream 4979 true Chr11: 3677415-3682393 Phaseolus vulgaris
Phvul.011G040600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3677415-3678414 Phaseolus vulgaris
Phvul.011G040600 2.0kb upstream 2.0kb upstream 5979 true Chr11: 3678415-3684393 Phaseolus vulgaris
Phvul.011G040600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3682394-3684393 Phaseolus vulgaris
Phvul.011G040600 2.0kb downstream 2.0kb downstream 5979 true Chr11: 3676415-3682393 Phaseolus vulgaris
Phvul.011G040600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3676415-3678414 Phaseolus vulgaris
Phvul.011G040600 5.0kb upstream 5.0kb upstream 8979 true Chr11: 3678415-3687393 Phaseolus vulgaris
Phvul.011G040600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3682394-3687393 Phaseolus vulgaris
Phvul.011G040600 5.0kb downstream 5.0kb downstream 8979 true Chr11: 3673415-3682393 Phaseolus vulgaris
Phvul.011G040600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3673415-3678414 Phaseolus vulgaris
Phvul.011G040600 10.0kb upstream 10.0kb upstream 13979 true Chr11: 3678415-3692393 Phaseolus vulgaris
Phvul.011G040600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3682394-3692393 Phaseolus vulgaris
Phvul.011G040600 10.0kb downstream 10.0kb downstream 13979 true Chr11: 3668415-3682393 Phaseolus vulgaris
Phvul.011G040600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3668415-3678414 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299819 5265 Fabidae View MSA
124062389 5270 Rosid View MSA
123737469 5271 Pentapetalae View MSA
122788278 5272 Eudicot View MSA
122044268 5273 Angiosperm View MSA
121310263 5274 Embryophyte View MSA
123425249 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.28142 0.0 12.6429    
cufflinks 4.44585 0.0 13.0854    
cufflinks 33.0454 0.0 85.5028   High
cufflinks 4.47712 0.0 13.2474    
cufflinks 3.87203 0.0 11.6454    
cufflinks 12.7568 0.0 34.0321   High
cufflinks 0.917996 0.0 3.2276   Low
cufflinks 1.61856 0.0 5.32056    
cufflinks 0.702004 0.0 2.53901   Low
cufflinks 5.4909 0.0 15.8156    
cufflinks 2.88056 0.0 8.95092    

0 Strain