Gene : Phvul.011G042200 P. vulgaris v2.1
Defline:  (1 of 1) K14565 - nucleolar protein 58 (NOP58) Genomic Order:  438
Name:  ? Phvul.011G042200 Secondary Identifier:  ? PAC:37155482
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G042200 0.5kb upstream 0.5kb upstream 4749 true Chr11: 3846131-3850879 Phaseolus vulgaris
Phvul.011G042200 0.5kb upstream 0.5kb upstream 500 false Chr11: 3850380-3850879 Phaseolus vulgaris
Phvul.011G042200 0.5kb downstream 0.5kb downstream 4749 true Chr11: 3845631-3850379 Phaseolus vulgaris
Phvul.011G042200 0.5kb downstream 0.5kb downstream 500 false Chr11: 3845631-3846130 Phaseolus vulgaris
Phvul.011G042200 1.0kb upstream 1.0kb upstream 5249 true Chr11: 3846131-3851379 Phaseolus vulgaris
Phvul.011G042200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3850380-3851379 Phaseolus vulgaris
Phvul.011G042200 1.0kb downstream 1.0kb downstream 5249 true Chr11: 3845131-3850379 Phaseolus vulgaris
Phvul.011G042200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3845131-3846130 Phaseolus vulgaris
Phvul.011G042200 2.0kb upstream 2.0kb upstream 6249 true Chr11: 3846131-3852379 Phaseolus vulgaris
Phvul.011G042200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3850380-3852379 Phaseolus vulgaris
Phvul.011G042200 2.0kb downstream 2.0kb downstream 6249 true Chr11: 3844131-3850379 Phaseolus vulgaris
Phvul.011G042200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3844131-3846130 Phaseolus vulgaris
Phvul.011G042200 5.0kb upstream 5.0kb upstream 9249 true Chr11: 3846131-3855379 Phaseolus vulgaris
Phvul.011G042200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3850380-3855379 Phaseolus vulgaris
Phvul.011G042200 5.0kb downstream 5.0kb downstream 9249 true Chr11: 3841131-3850379 Phaseolus vulgaris
Phvul.011G042200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3841131-3846130 Phaseolus vulgaris
Phvul.011G042200 10.0kb upstream 10.0kb upstream 14249 true Chr11: 3846131-3860379 Phaseolus vulgaris
Phvul.011G042200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3850380-3860379 Phaseolus vulgaris
Phvul.011G042200 10.0kb downstream 10.0kb downstream 14249 true Chr11: 3836131-3850379 Phaseolus vulgaris
Phvul.011G042200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3836131-3846130 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041003 5273 Angiosperm View MSA
122299942 5265 Fabidae View MSA
124068125 5270 Rosid View MSA
123744603 5271 Pentapetalae View MSA
122786975 5272 Eudicot View MSA
121345420 5274 Embryophyte View MSA
123426153 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.6464 0.0 102.812 High  
cufflinks 70.2312 0.0 197.569 High High
cufflinks 30.4268 0.0 79.7666    
cufflinks 19.2502 0.0 49.7599   Low
cufflinks 54.1709 0.0 147.176 High  
cufflinks 28.1302 0.0 73.4747   Low
cufflinks 61.467 0.0 171.239 High  
cufflinks 66.4789 0.0 187.244 High  
cufflinks 74.0005 0.0 209.994 High High
cufflinks 40.6551 0.0 108.321 High  
cufflinks 45.6008 0.0 122.498 High  

0 Strain