Gene : Phvul.011G042600 P. vulgaris v2.1
Defline:  (1 of 5) PTHR22952//PTHR22952:SF182 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  442
Name:  ? Phvul.011G042600 Secondary Identifier:  ? PAC:37156721
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G042600 0.5kb upstream 0.5kb upstream 2235 true Chr11: 3880672-3882906 Phaseolus vulgaris
Phvul.011G042600 0.5kb upstream 0.5kb upstream 500 false Chr11: 3882407-3882906 Phaseolus vulgaris
Phvul.011G042600 0.5kb downstream 0.5kb downstream 2235 true Chr11: 3880172-3882406 Phaseolus vulgaris
Phvul.011G042600 0.5kb downstream 0.5kb downstream 500 false Chr11: 3880172-3880671 Phaseolus vulgaris
Phvul.011G042600 1.0kb upstream 1.0kb upstream 2735 true Chr11: 3880672-3883406 Phaseolus vulgaris
Phvul.011G042600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3882407-3883406 Phaseolus vulgaris
Phvul.011G042600 1.0kb downstream 1.0kb downstream 2735 true Chr11: 3879672-3882406 Phaseolus vulgaris
Phvul.011G042600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3879672-3880671 Phaseolus vulgaris
Phvul.011G042600 2.0kb upstream 2.0kb upstream 3735 true Chr11: 3880672-3884406 Phaseolus vulgaris
Phvul.011G042600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3882407-3884406 Phaseolus vulgaris
Phvul.011G042600 2.0kb downstream 2.0kb downstream 3735 true Chr11: 3878672-3882406 Phaseolus vulgaris
Phvul.011G042600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3878672-3880671 Phaseolus vulgaris
Phvul.011G042600 5.0kb upstream 5.0kb upstream 6735 true Chr11: 3880672-3887406 Phaseolus vulgaris
Phvul.011G042600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3882407-3887406 Phaseolus vulgaris
Phvul.011G042600 5.0kb downstream 5.0kb downstream 6735 true Chr11: 3875672-3882406 Phaseolus vulgaris
Phvul.011G042600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3875672-3880671 Phaseolus vulgaris
Phvul.011G042600 10.0kb upstream 10.0kb upstream 11735 true Chr11: 3880672-3892406 Phaseolus vulgaris
Phvul.011G042600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3882407-3892406 Phaseolus vulgaris
Phvul.011G042600 10.0kb downstream 10.0kb downstream 11735 true Chr11: 3870672-3882406 Phaseolus vulgaris
Phvul.011G042600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3870672-3880671 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313367 5265 Fabidae View MSA
124069594 5270 Rosid View MSA
123751386 5271 Pentapetalae View MSA
122786761 5272 Eudicot View MSA
122045115 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 123.613 0.0 402.628 High  
cufflinks 151.475 0.0 518.062 High  
cufflinks 22.3058 0.0 63.1721   Low
cufflinks 108.074 0.0 343.073 High  
cufflinks 249.621 0.0 775.968 High  
cufflinks 40.5653 0.0 113.633 High Low
cufflinks 67.9463 0.0 198.655 High  
cufflinks 226.66 0.0 690.241 High  
cufflinks 44.0418 0.0 122.651 High Low
cufflinks 316.576 0.0 1065.11 High High
cufflinks 307.392 0.0 1014.6 High High

0 Strain