Gene : Phvul.011G041300 P. vulgaris v2.1
Defline:  (1 of 1) K02212 - DNA replication licensing factor MCM4 (MCM4, CDC54) Genomic Order:  429
Name:  ? Phvul.011G041300 Secondary Identifier:  ? PAC:37154651
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G041300 0.5kb upstream 0.5kb upstream 6352 true Chr11: 3752820-3759171 Phaseolus vulgaris
Phvul.011G041300 0.5kb upstream 0.5kb upstream 500 false Chr11: 3752820-3753319 Phaseolus vulgaris
Phvul.011G041300 0.5kb downstream 0.5kb downstream 6352 true Chr11: 3753320-3759671 Phaseolus vulgaris
Phvul.011G041300 0.5kb downstream 0.5kb downstream 500 false Chr11: 3759172-3759671 Phaseolus vulgaris
Phvul.011G041300 1.0kb upstream 1.0kb upstream 6852 true Chr11: 3752320-3759171 Phaseolus vulgaris
Phvul.011G041300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3752320-3753319 Phaseolus vulgaris
Phvul.011G041300 1.0kb downstream 1.0kb downstream 6852 true Chr11: 3753320-3760171 Phaseolus vulgaris
Phvul.011G041300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3759172-3760171 Phaseolus vulgaris
Phvul.011G041300 2.0kb upstream 2.0kb upstream 7852 true Chr11: 3751320-3759171 Phaseolus vulgaris
Phvul.011G041300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3751320-3753319 Phaseolus vulgaris
Phvul.011G041300 2.0kb downstream 2.0kb downstream 7852 true Chr11: 3753320-3761171 Phaseolus vulgaris
Phvul.011G041300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3759172-3761171 Phaseolus vulgaris
Phvul.011G041300 5.0kb upstream 5.0kb upstream 10852 true Chr11: 3748320-3759171 Phaseolus vulgaris
Phvul.011G041300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3748320-3753319 Phaseolus vulgaris
Phvul.011G041300 5.0kb downstream 5.0kb downstream 10852 true Chr11: 3753320-3764171 Phaseolus vulgaris
Phvul.011G041300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3759172-3764171 Phaseolus vulgaris
Phvul.011G041300 10.0kb upstream 10.0kb upstream 15852 true Chr11: 3743320-3759171 Phaseolus vulgaris
Phvul.011G041300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3743320-3753319 Phaseolus vulgaris
Phvul.011G041300 10.0kb downstream 10.0kb downstream 15852 true Chr11: 3753320-3769171 Phaseolus vulgaris
Phvul.011G041300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3759172-3769171 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304247 5265 Fabidae View MSA
124061102 5270 Rosid View MSA
123748874 5271 Pentapetalae View MSA
122788296 5272 Eudicot View MSA
122046085 5273 Angiosperm View MSA
123428876 5275 Viridiplantae View MSA
121346646 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.39696 0.0 14.4745    
cufflinks 18.1482 0.0 47.1139   High
cufflinks 5.08892 0.0 13.7202    
cufflinks 6.18589 0.0 16.4718    
cufflinks 8.2434 0.0 21.5583    
cufflinks 14.5071 0.0 37.5133    
cufflinks 15.4717 0.0 40.048    
cufflinks 17.8808 0.0 46.4278    
cufflinks 12.7081 0.0 32.8497    
cufflinks 1.58728 0.0 4.80832   Low
cufflinks 10.0382 0.0 26.0507    

0 Strain