Gene : Phvul.011G041700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR33923:SF2 - CALMODULIN-BINDING PROTEIN-LIKE PROTEIN Genomic Order:  433
Name:  ? Phvul.011G041700 Secondary Identifier:  ? PAC:37156276
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G041700 0.5kb upstream 0.5kb upstream 3217 true Chr11: 3804428-3807644 Phaseolus vulgaris
Phvul.011G041700 0.5kb upstream 0.5kb upstream 500 false Chr11: 3807145-3807644 Phaseolus vulgaris
Phvul.011G041700 0.5kb downstream 0.5kb downstream 3217 true Chr11: 3803928-3807144 Phaseolus vulgaris
Phvul.011G041700 0.5kb downstream 0.5kb downstream 500 false Chr11: 3803928-3804427 Phaseolus vulgaris
Phvul.011G041700 1.0kb upstream 1.0kb upstream 3717 true Chr11: 3804428-3808144 Phaseolus vulgaris
Phvul.011G041700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3807145-3808144 Phaseolus vulgaris
Phvul.011G041700 1.0kb downstream 1.0kb downstream 3717 true Chr11: 3803428-3807144 Phaseolus vulgaris
Phvul.011G041700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3803428-3804427 Phaseolus vulgaris
Phvul.011G041700 2.0kb upstream 2.0kb upstream 4717 true Chr11: 3804428-3809144 Phaseolus vulgaris
Phvul.011G041700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3807145-3809144 Phaseolus vulgaris
Phvul.011G041700 2.0kb downstream 2.0kb downstream 4717 true Chr11: 3802428-3807144 Phaseolus vulgaris
Phvul.011G041700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3802428-3804427 Phaseolus vulgaris
Phvul.011G041700 5.0kb upstream 5.0kb upstream 7717 true Chr11: 3804428-3812144 Phaseolus vulgaris
Phvul.011G041700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3807145-3812144 Phaseolus vulgaris
Phvul.011G041700 5.0kb downstream 5.0kb downstream 7717 true Chr11: 3799428-3807144 Phaseolus vulgaris
Phvul.011G041700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3799428-3804427 Phaseolus vulgaris
Phvul.011G041700 10.0kb upstream 10.0kb upstream 12717 true Chr11: 3804428-3817144 Phaseolus vulgaris
Phvul.011G041700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3807145-3817144 Phaseolus vulgaris
Phvul.011G041700 10.0kb downstream 10.0kb downstream 12717 true Chr11: 3794428-3807144 Phaseolus vulgaris
Phvul.011G041700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3794428-3804427 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313772 5265 Fabidae View MSA
124070839 5270 Rosid View MSA
123751830 5271 Pentapetalae View MSA
122794379 5272 Eudicot View MSA
122048644 5273 Angiosperm View MSA
121311054 5274 Embryophyte View MSA
123348408 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.546382 0.0 1.92297    
cufflinks 0.398678 0.0 1.44875 Low  
cufflinks 0.296019 0.0 1.09819 Low  
cufflinks 0.201355 0.0 0.778278 Low  
cufflinks 0.349636 0.0 1.2951 Low  
cufflinks 18.2538 0.0 47.1859   High
cufflinks 0.506328 0.0 1.79476 Low  
cufflinks 0.140997 0.0 0.555019 Low  
cufflinks 0.0920555 0.0 0.376142 Low Low
cufflinks 0.138075 0.0 0.54818 Low  
cufflinks 3.4646 0.0 9.99128   High

0 Strain