Gene : Phvul.011G043000 P. vulgaris v2.1
Defline:  (1 of 2) 1.5.1.3//2.1.1.45 - Dihydrofolate reductase / Tetrahydrofolate dehydrogenase Genomic Order:  446
Name:  ? Phvul.011G043000 Secondary Identifier:  ? PAC:37155421
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3841 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6612 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6614 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7184 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7199 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7200 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7210 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7211 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G043000 0.5kb upstream 0.5kb upstream 5787 true Chr11: 3918194-3923980 Phaseolus vulgaris
Phvul.011G043000 0.5kb upstream 0.5kb upstream 500 false Chr11: 3918194-3918693 Phaseolus vulgaris
Phvul.011G043000 0.5kb downstream 0.5kb downstream 5787 true Chr11: 3918694-3924480 Phaseolus vulgaris
Phvul.011G043000 0.5kb downstream 0.5kb downstream 500 false Chr11: 3923981-3924480 Phaseolus vulgaris
Phvul.011G043000 1.0kb upstream 1.0kb upstream 6287 true Chr11: 3917694-3923980 Phaseolus vulgaris
Phvul.011G043000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3917694-3918693 Phaseolus vulgaris
Phvul.011G043000 1.0kb downstream 1.0kb downstream 6287 true Chr11: 3918694-3924980 Phaseolus vulgaris
Phvul.011G043000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3923981-3924980 Phaseolus vulgaris
Phvul.011G043000 2.0kb upstream 2.0kb upstream 7287 true Chr11: 3916694-3923980 Phaseolus vulgaris
Phvul.011G043000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3916694-3918693 Phaseolus vulgaris
Phvul.011G043000 2.0kb downstream 2.0kb downstream 7287 true Chr11: 3918694-3925980 Phaseolus vulgaris
Phvul.011G043000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3923981-3925980 Phaseolus vulgaris
Phvul.011G043000 5.0kb upstream 5.0kb upstream 10287 true Chr11: 3913694-3923980 Phaseolus vulgaris
Phvul.011G043000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3913694-3918693 Phaseolus vulgaris
Phvul.011G043000 5.0kb downstream 5.0kb downstream 10287 true Chr11: 3918694-3928980 Phaseolus vulgaris
Phvul.011G043000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3923981-3928980 Phaseolus vulgaris
Phvul.011G043000 10.0kb upstream 10.0kb upstream 15287 true Chr11: 3908694-3923980 Phaseolus vulgaris
Phvul.011G043000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3908694-3918693 Phaseolus vulgaris
Phvul.011G043000 10.0kb downstream 10.0kb downstream 15287 true Chr11: 3918694-3933980 Phaseolus vulgaris
Phvul.011G043000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3923981-3933980 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310398 5265 Fabidae View MSA
124063247 5270 Rosid View MSA
123746183 5271 Pentapetalae View MSA
122795819 5272 Eudicot View MSA
122041907 5273 Angiosperm View MSA
121345404 5274 Embryophyte View MSA
123424391 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.74514 0.0 10.4054    
cufflinks 1.82714 0.0 7.65419    
cufflinks 1.42268 0.0 4.98103    
cufflinks 2.20025 0.0 8.90088    
cufflinks 2.43942 0.0 7.76733    
cufflinks 5.32874 0.0 17.2532   High
cufflinks 2.03877 0.0 6.63964    
cufflinks 0.750055 0.0 3.07468   Low
cufflinks 2.9421 0.0 11.1194    
cufflinks 2.48549 0.0 9.74839    
cufflinks 2.65062 0.0 10.4671    

0 Strain